Gene : Bradi2g41270 B. distachyon v3.1
Defline:  (1 of 1) PTHR12000//PTHR12000:SF15 - HEMOGLOBINASE FAMILY MEMBER // VACUOLAR-PROCESSING ENZYME ALPHA-ISOZYME-RELATED Genomic Order:  4928
Name:  ? Bradi2g41270 Secondary Identifier:  ? PAC:32774114
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g41270 0.5kb upstream 0.5kb upstream 6111 true Bd2: 41294662-41300772 Brachypodium distachyon
Bradi2g41270 0.5kb upstream 0.5kb upstream 500 false Bd2: 41294662-41295161 Brachypodium distachyon
Bradi2g41270 0.5kb downstream 0.5kb downstream 6111 true Bd2: 41295162-41301272 Brachypodium distachyon
Bradi2g41270 0.5kb downstream 0.5kb downstream 500 false Bd2: 41300773-41301272 Brachypodium distachyon
Bradi2g41270 1.0kb upstream 1.0kb upstream 6611 true Bd2: 41294162-41300772 Brachypodium distachyon
Bradi2g41270 1.0kb upstream 1.0kb upstream 1000 false Bd2: 41294162-41295161 Brachypodium distachyon
Bradi2g41270 1.0kb downstream 1.0kb downstream 6611 true Bd2: 41295162-41301772 Brachypodium distachyon
Bradi2g41270 1.0kb downstream 1.0kb downstream 1000 false Bd2: 41300773-41301772 Brachypodium distachyon
Bradi2g41270 2.0kb upstream 2.0kb upstream 7611 true Bd2: 41293162-41300772 Brachypodium distachyon
Bradi2g41270 2.0kb upstream 2.0kb upstream 2000 false Bd2: 41293162-41295161 Brachypodium distachyon
Bradi2g41270 2.0kb downstream 2.0kb downstream 7611 true Bd2: 41295162-41302772 Brachypodium distachyon
Bradi2g41270 2.0kb downstream 2.0kb downstream 2000 false Bd2: 41300773-41302772 Brachypodium distachyon
Bradi2g41270 5.0kb upstream 5.0kb upstream 10611 true Bd2: 41290162-41300772 Brachypodium distachyon
Bradi2g41270 5.0kb upstream 5.0kb upstream 5000 false Bd2: 41290162-41295161 Brachypodium distachyon
Bradi2g41270 5.0kb downstream 5.0kb downstream 10611 true Bd2: 41295162-41305772 Brachypodium distachyon
Bradi2g41270 5.0kb downstream 5.0kb downstream 5000 false Bd2: 41300773-41305772 Brachypodium distachyon
Bradi2g41270 10.0kb upstream 10.0kb upstream 15611 true Bd2: 41285162-41300772 Brachypodium distachyon
Bradi2g41270 10.0kb upstream 10.0kb upstream 10000 false Bd2: 41285162-41295161 Brachypodium distachyon
Bradi2g41270 10.0kb downstream 10.0kb downstream 15611 true Bd2: 41295162-41310772 Brachypodium distachyon
Bradi2g41270 10.0kb downstream 10.0kb downstream 10000 false Bd2: 41300773-41310772 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124576205 5269 Grass View MSA
122046408 5273 Angiosperm View MSA
121350664 5274 Embryophyte View MSA
123428632 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 47.574     High  
cufflinks 35.299     High  
cufflinks 8.845        
cufflinks 16.415     High  
cufflinks 5.128       Low
cufflinks 65.936     High High
cufflinks 53.731     High High
cufflinks 5.555       Low
cufflinks 24.92     High  
cufflinks 3.961       Low
cufflinks 73.34     High High
cufflinks 26.334     High  
cufflinks 79.648     High High
cufflinks 56.627     High High
cufflinks 8.464        
cufflinks 41.845     High  
cufflinks 22.43     High  
cufflinks 24.94     High  
cufflinks 13.571     High  
cufflinks 12.196     High  
cufflinks 37.519     High  
cufflinks 3.917       Low
cufflinks 5.074       Low
cufflinks 33.151     High  
cufflinks 46.315     High  
cufflinks 7.964        
cufflinks 139.745     High High
cufflinks 6.687       Low
cufflinks 5.226       Low
cufflinks 18.231     High  

0 Strain