Gene : Bradi2g37100 B. distachyon v3.1
Defline:  (1 of 1) PTHR24128//PTHR24128:SF14 - FAMILY NOT NAMED // E3 UBIQUITIN-PROTEIN LIGASE XBAT31-RELATED Genomic Order:  4402
Name:  ? Bradi2g37100 Secondary Identifier:  ? PAC:32776101
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g37100 0.5kb upstream 0.5kb upstream 4428 true Bd2: 37235710-37240137 Brachypodium distachyon
Bradi2g37100 0.5kb upstream 0.5kb upstream 500 false Bd2: 37239638-37240137 Brachypodium distachyon
Bradi2g37100 0.5kb downstream 0.5kb downstream 4428 true Bd2: 37235210-37239637 Brachypodium distachyon
Bradi2g37100 0.5kb downstream 0.5kb downstream 500 false Bd2: 37235210-37235709 Brachypodium distachyon
Bradi2g37100 1.0kb upstream 1.0kb upstream 4928 true Bd2: 37235710-37240637 Brachypodium distachyon
Bradi2g37100 1.0kb upstream 1.0kb upstream 1000 false Bd2: 37239638-37240637 Brachypodium distachyon
Bradi2g37100 1.0kb downstream 1.0kb downstream 4928 true Bd2: 37234710-37239637 Brachypodium distachyon
Bradi2g37100 1.0kb downstream 1.0kb downstream 1000 false Bd2: 37234710-37235709 Brachypodium distachyon
Bradi2g37100 2.0kb upstream 2.0kb upstream 5928 true Bd2: 37235710-37241637 Brachypodium distachyon
Bradi2g37100 2.0kb upstream 2.0kb upstream 2000 false Bd2: 37239638-37241637 Brachypodium distachyon
Bradi2g37100 2.0kb downstream 2.0kb downstream 5928 true Bd2: 37233710-37239637 Brachypodium distachyon
Bradi2g37100 2.0kb downstream 2.0kb downstream 2000 false Bd2: 37233710-37235709 Brachypodium distachyon
Bradi2g37100 5.0kb upstream 5.0kb upstream 8928 true Bd2: 37235710-37244637 Brachypodium distachyon
Bradi2g37100 5.0kb upstream 5.0kb upstream 5000 false Bd2: 37239638-37244637 Brachypodium distachyon
Bradi2g37100 5.0kb downstream 5.0kb downstream 8928 true Bd2: 37230710-37239637 Brachypodium distachyon
Bradi2g37100 5.0kb downstream 5.0kb downstream 5000 false Bd2: 37230710-37235709 Brachypodium distachyon
Bradi2g37100 10.0kb upstream 10.0kb upstream 13928 true Bd2: 37235710-37249637 Brachypodium distachyon
Bradi2g37100 10.0kb upstream 10.0kb upstream 10000 false Bd2: 37239638-37249637 Brachypodium distachyon
Bradi2g37100 10.0kb downstream 10.0kb downstream 13928 true Bd2: 37225710-37239637 Brachypodium distachyon
Bradi2g37100 10.0kb downstream 10.0kb downstream 10000 false Bd2: 37225710-37235709 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577818 5269 Grass View MSA
122045782 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121344984 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.219        
cufflinks 11.451     High  
cufflinks 11.213     High  
cufflinks 8.535        
cufflinks 6.034        
cufflinks 8.684        
cufflinks 13.209     High  
cufflinks 6.92        
cufflinks 8.379        
cufflinks 6.719        
cufflinks 2.382       Low
cufflinks 5.811        
cufflinks 2.669       Low
cufflinks 1.513       Low
cufflinks 3.166       Low
cufflinks 8.423        
cufflinks 8.804        
cufflinks 30.4     High High
cufflinks 21.054     High High
cufflinks 1.449       Low
cufflinks 24.489     High High
cufflinks 7.263        
cufflinks 7.033        
cufflinks 6.701        
cufflinks 8.688        
cufflinks 9.231        
cufflinks 2.296       Low
cufflinks 10.821     High  
cufflinks 9.906        
cufflinks 17.219     High High

0 Strain