Gene : Bradi2g38290 B. distachyon v3.1
Defline:  (1 of 2) PTHR21711 - KUB3-PROV PROTEIN Genomic Order:  4573
Name:  ? Bradi2g38290 Secondary Identifier:  ? PAC:32781077
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g38290 0.5kb upstream 0.5kb upstream 3262 true Bd2: 38392077-38395338 Brachypodium distachyon
Bradi2g38290 0.5kb upstream 0.5kb upstream 500 false Bd2: 38394839-38395338 Brachypodium distachyon
Bradi2g38290 0.5kb downstream 0.5kb downstream 3262 true Bd2: 38391577-38394838 Brachypodium distachyon
Bradi2g38290 0.5kb downstream 0.5kb downstream 500 false Bd2: 38391577-38392076 Brachypodium distachyon
Bradi2g38290 1.0kb upstream 1.0kb upstream 3762 true Bd2: 38392077-38395838 Brachypodium distachyon
Bradi2g38290 1.0kb upstream 1.0kb upstream 1000 false Bd2: 38394839-38395838 Brachypodium distachyon
Bradi2g38290 1.0kb downstream 1.0kb downstream 3762 true Bd2: 38391077-38394838 Brachypodium distachyon
Bradi2g38290 1.0kb downstream 1.0kb downstream 1000 false Bd2: 38391077-38392076 Brachypodium distachyon
Bradi2g38290 2.0kb upstream 2.0kb upstream 4762 true Bd2: 38392077-38396838 Brachypodium distachyon
Bradi2g38290 2.0kb upstream 2.0kb upstream 2000 false Bd2: 38394839-38396838 Brachypodium distachyon
Bradi2g38290 2.0kb downstream 2.0kb downstream 4762 true Bd2: 38390077-38394838 Brachypodium distachyon
Bradi2g38290 2.0kb downstream 2.0kb downstream 2000 false Bd2: 38390077-38392076 Brachypodium distachyon
Bradi2g38290 5.0kb upstream 5.0kb upstream 7762 true Bd2: 38392077-38399838 Brachypodium distachyon
Bradi2g38290 5.0kb upstream 5.0kb upstream 5000 false Bd2: 38394839-38399838 Brachypodium distachyon
Bradi2g38290 5.0kb downstream 5.0kb downstream 7762 true Bd2: 38387077-38394838 Brachypodium distachyon
Bradi2g38290 5.0kb downstream 5.0kb downstream 5000 false Bd2: 38387077-38392076 Brachypodium distachyon
Bradi2g38290 10.0kb upstream 10.0kb upstream 12762 true Bd2: 38392077-38404838 Brachypodium distachyon
Bradi2g38290 10.0kb upstream 10.0kb upstream 10000 false Bd2: 38394839-38404838 Brachypodium distachyon
Bradi2g38290 10.0kb downstream 10.0kb downstream 12762 true Bd2: 38382077-38394838 Brachypodium distachyon
Bradi2g38290 10.0kb downstream 10.0kb downstream 10000 false Bd2: 38382077-38392076 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124572373 5269 Grass View MSA
122045264 5273 Angiosperm View MSA
121345086 5274 Embryophyte View MSA
123426111 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.391        
cufflinks 4.383        
cufflinks 3.891        
cufflinks 5.391        
cufflinks 3.771        
cufflinks 4.15        
cufflinks 4.413        
cufflinks 3.133        
cufflinks 3.706        
cufflinks 4.599        
cufflinks 2.27       Low
cufflinks 2.855        
cufflinks 1.046       Low
cufflinks 1.845       Low
cufflinks 2.37       Low
cufflinks 3.851        
cufflinks 6.058        
cufflinks 6.123        
cufflinks 6.141        
cufflinks 3.368        
cufflinks 7.203       High
cufflinks 2.842        
cufflinks 2.752        
cufflinks 3.368        
cufflinks 5.813        
cufflinks 5.239        
cufflinks 1.708       Low
cufflinks 4.879        
cufflinks 4.856        
cufflinks 5.047        

0 Strain