Gene : Bradi4g09587 B. distachyon v3.1
Defline:  (1 of 16) PTHR23155//PTHR23155:SF541 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN Genomic Order:  1285
Name:  ? Bradi4g09587 Secondary Identifier:  ? PAC:32783981
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g09587 0.5kb upstream 0.5kb upstream 4916 true Bd4: 8992665-8997580 Brachypodium distachyon
Bradi4g09587 0.5kb upstream 0.5kb upstream 500 false Bd4: 8992665-8993164 Brachypodium distachyon
Bradi4g09587 0.5kb downstream 0.5kb downstream 4916 true Bd4: 8993165-8998080 Brachypodium distachyon
Bradi4g09587 0.5kb downstream 0.5kb downstream 500 false Bd4: 8997581-8998080 Brachypodium distachyon
Bradi4g09587 1.0kb upstream 1.0kb upstream 5416 true Bd4: 8992165-8997580 Brachypodium distachyon
Bradi4g09587 1.0kb upstream 1.0kb upstream 1000 false Bd4: 8992165-8993164 Brachypodium distachyon
Bradi4g09587 1.0kb downstream 1.0kb downstream 5416 true Bd4: 8993165-8998580 Brachypodium distachyon
Bradi4g09587 1.0kb downstream 1.0kb downstream 1000 false Bd4: 8997581-8998580 Brachypodium distachyon
Bradi4g09587 2.0kb upstream 2.0kb upstream 6416 true Bd4: 8991165-8997580 Brachypodium distachyon
Bradi4g09587 2.0kb upstream 2.0kb upstream 2000 false Bd4: 8991165-8993164 Brachypodium distachyon
Bradi4g09587 2.0kb downstream 2.0kb downstream 6416 true Bd4: 8993165-8999580 Brachypodium distachyon
Bradi4g09587 2.0kb downstream 2.0kb downstream 2000 false Bd4: 8997581-8999580 Brachypodium distachyon
Bradi4g09587 5.0kb upstream 5.0kb upstream 9416 true Bd4: 8988165-8997580 Brachypodium distachyon
Bradi4g09587 5.0kb upstream 5.0kb upstream 5000 false Bd4: 8988165-8993164 Brachypodium distachyon
Bradi4g09587 5.0kb downstream 5.0kb downstream 9416 true Bd4: 8993165-9002580 Brachypodium distachyon
Bradi4g09587 5.0kb downstream 5.0kb downstream 5000 false Bd4: 8997581-9002580 Brachypodium distachyon
Bradi4g09587 10.0kb upstream 10.0kb upstream 14416 true Bd4: 8983165-8997580 Brachypodium distachyon
Bradi4g09587 10.0kb upstream 10.0kb upstream 10000 false Bd4: 8983165-8993164 Brachypodium distachyon
Bradi4g09587 10.0kb downstream 10.0kb downstream 14416 true Bd4: 8993165-9007580 Brachypodium distachyon
Bradi4g09587 10.0kb downstream 10.0kb downstream 10000 false Bd4: 8997581-9007580 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124590789 5269 Grass View MSA
122051706 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.507        
cufflinks 5.258        
cufflinks 4.696        
cufflinks 4.595        
cufflinks 1.434       Low
cufflinks 4.619        
cufflinks 4.261        
cufflinks 4.02        
cufflinks 4.8        
cufflinks 2.329        
cufflinks 4.172        
cufflinks 4.246        
cufflinks 3.033        
cufflinks 2.885        
cufflinks 2.688        
cufflinks 4.093        
cufflinks 2.623        
cufflinks 5.503        
cufflinks 2.573        
cufflinks 0.516       Low
cufflinks 4.051        
cufflinks 3.749        
cufflinks 3.949        
cufflinks 4.301        
cufflinks 3.902        
cufflinks 4.116        
cufflinks 4.925        
cufflinks 3.583        
cufflinks 3.611        
cufflinks 6.488       High

0 Strain