Gene : Bradi4g01150 B. distachyon v3.1
Defline:  (1 of 3) K03120 - transcription initiation factor TFIID TATA-box-binding protein (TBP, tbp) Genomic Order:  122
Name:  ? Bradi4g01150 Secondary Identifier:  ? PAC:32784192
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g01150 0.5kb upstream 0.5kb upstream 5263 true Bd4: 730717-735979 Brachypodium distachyon
Bradi4g01150 0.5kb upstream 0.5kb upstream 500 false Bd4: 735480-735979 Brachypodium distachyon
Bradi4g01150 0.5kb downstream 0.5kb downstream 5263 true Bd4: 730217-735479 Brachypodium distachyon
Bradi4g01150 0.5kb downstream 0.5kb downstream 500 false Bd4: 730217-730716 Brachypodium distachyon
Bradi4g01150 1.0kb upstream 1.0kb upstream 5763 true Bd4: 730717-736479 Brachypodium distachyon
Bradi4g01150 1.0kb upstream 1.0kb upstream 1000 false Bd4: 735480-736479 Brachypodium distachyon
Bradi4g01150 1.0kb downstream 1.0kb downstream 5763 true Bd4: 729717-735479 Brachypodium distachyon
Bradi4g01150 1.0kb downstream 1.0kb downstream 1000 false Bd4: 729717-730716 Brachypodium distachyon
Bradi4g01150 2.0kb upstream 2.0kb upstream 6763 true Bd4: 730717-737479 Brachypodium distachyon
Bradi4g01150 2.0kb upstream 2.0kb upstream 2000 false Bd4: 735480-737479 Brachypodium distachyon
Bradi4g01150 2.0kb downstream 2.0kb downstream 6763 true Bd4: 728717-735479 Brachypodium distachyon
Bradi4g01150 2.0kb downstream 2.0kb downstream 2000 false Bd4: 728717-730716 Brachypodium distachyon
Bradi4g01150 5.0kb upstream 5.0kb upstream 9763 true Bd4: 730717-740479 Brachypodium distachyon
Bradi4g01150 5.0kb upstream 5.0kb upstream 5000 false Bd4: 735480-740479 Brachypodium distachyon
Bradi4g01150 5.0kb downstream 5.0kb downstream 9763 true Bd4: 725717-735479 Brachypodium distachyon
Bradi4g01150 5.0kb downstream 5.0kb downstream 5000 false Bd4: 725717-730716 Brachypodium distachyon
Bradi4g01150 10.0kb upstream 10.0kb upstream 14763 true Bd4: 730717-745479 Brachypodium distachyon
Bradi4g01150 10.0kb upstream 10.0kb upstream 10000 false Bd4: 735480-745479 Brachypodium distachyon
Bradi4g01150 10.0kb downstream 10.0kb downstream 14763 true Bd4: 720717-735479 Brachypodium distachyon
Bradi4g01150 10.0kb downstream 10.0kb downstream 10000 false Bd4: 720717-730716 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124569114 5269 Grass View MSA
122046126 5273 Angiosperm View MSA
123429185 5275 Viridiplantae View MSA
121349658 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.062     Low Low
cufflinks 0.171        
cufflinks 0.244        
cufflinks 0.166        
cufflinks 0.088     Low Low
cufflinks 0.166        
cufflinks 0.147        
cufflinks 0.159        
cufflinks 0.161        
cufflinks 0.286       High
cufflinks 0.319       High
cufflinks 0.148        
cufflinks 0.213        
cufflinks 0.232        
cufflinks 0.121        
cufflinks 0.123        
cufflinks 0.113     Low  
cufflinks 0.116     Low  
cufflinks 0.13     Low  
cufflinks 0.09     Low Low
cufflinks 0.137        
cufflinks 0.235        
cufflinks 0.177        
cufflinks 0.177        
cufflinks 0.144        
cufflinks 0.261       High
cufflinks 0.443       High
cufflinks 0.32       High
cufflinks 0.28       High
cufflinks 0.103     Low  

0 Strain