Gene : Bradi4g06290 B. distachyon v3.1
Defline:  (1 of 4) KOG1595 - CCCH-type Zn-finger protein Genomic Order:  817
Name:  ? Bradi4g06290 Secondary Identifier:  ? PAC:32788998
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g06290 0.5kb upstream 0.5kb upstream 2982 true Bd4: 5248883-5251864 Brachypodium distachyon
Bradi4g06290 0.5kb upstream 0.5kb upstream 500 false Bd4: 5251365-5251864 Brachypodium distachyon
Bradi4g06290 0.5kb downstream 0.5kb downstream 2982 true Bd4: 5248383-5251364 Brachypodium distachyon
Bradi4g06290 0.5kb downstream 0.5kb downstream 500 false Bd4: 5248383-5248882 Brachypodium distachyon
Bradi4g06290 1.0kb upstream 1.0kb upstream 3482 true Bd4: 5248883-5252364 Brachypodium distachyon
Bradi4g06290 1.0kb upstream 1.0kb upstream 1000 false Bd4: 5251365-5252364 Brachypodium distachyon
Bradi4g06290 1.0kb downstream 1.0kb downstream 3482 true Bd4: 5247883-5251364 Brachypodium distachyon
Bradi4g06290 1.0kb downstream 1.0kb downstream 1000 false Bd4: 5247883-5248882 Brachypodium distachyon
Bradi4g06290 2.0kb upstream 2.0kb upstream 4482 true Bd4: 5248883-5253364 Brachypodium distachyon
Bradi4g06290 2.0kb upstream 2.0kb upstream 2000 false Bd4: 5251365-5253364 Brachypodium distachyon
Bradi4g06290 2.0kb downstream 2.0kb downstream 4482 true Bd4: 5246883-5251364 Brachypodium distachyon
Bradi4g06290 2.0kb downstream 2.0kb downstream 2000 false Bd4: 5246883-5248882 Brachypodium distachyon
Bradi4g06290 5.0kb upstream 5.0kb upstream 7482 true Bd4: 5248883-5256364 Brachypodium distachyon
Bradi4g06290 5.0kb upstream 5.0kb upstream 5000 false Bd4: 5251365-5256364 Brachypodium distachyon
Bradi4g06290 5.0kb downstream 5.0kb downstream 7482 true Bd4: 5243883-5251364 Brachypodium distachyon
Bradi4g06290 5.0kb downstream 5.0kb downstream 5000 false Bd4: 5243883-5248882 Brachypodium distachyon
Bradi4g06290 10.0kb upstream 10.0kb upstream 12482 true Bd4: 5248883-5261364 Brachypodium distachyon
Bradi4g06290 10.0kb upstream 10.0kb upstream 10000 false Bd4: 5251365-5261364 Brachypodium distachyon
Bradi4g06290 10.0kb downstream 10.0kb downstream 12482 true Bd4: 5238883-5251364 Brachypodium distachyon
Bradi4g06290 10.0kb downstream 10.0kb downstream 10000 false Bd4: 5238883-5248882 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027558 5273 Angiosperm View MSA
124570393 5269 Grass View MSA
123429052 5275 Viridiplantae View MSA
121351105 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.008       High
cufflinks 1.146        
cufflinks 1.263        
cufflinks 1.176        
cufflinks 1.851        
cufflinks 1.412        
cufflinks 1.246        
cufflinks 2.413        
cufflinks 1.818        
cufflinks 1.964        
cufflinks 1.523        
cufflinks 1.398        
cufflinks 1.104        
cufflinks 1.337        
cufflinks 1.982        
cufflinks 1.376        
cufflinks 1.0       Low
cufflinks 5.728       High
cufflinks 1.527        
cufflinks 2.346        
cufflinks 3.136       High
cufflinks 2.291        
cufflinks 2.976       High
cufflinks 1.376        
cufflinks 1.391        
cufflinks 1.162        
cufflinks 2.47        
cufflinks 1.606        
cufflinks 2.201        
cufflinks 1.771        

0 Strain