Gene : Bradi4g43517 B. distachyon v3.1
Defline:  (1 of 1) PTHR23346:SF19 - PROTEASOME-ASSOCIATED PROTEIN ECM29 HOMOLOG Genomic Order:  5612
Name:  ? Bradi4g43517 Secondary Identifier:  ? PAC:32786341
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g43517 0.5kb upstream 0.5kb upstream 16081 true Bd4: 47135097-47151177 Brachypodium distachyon
Bradi4g43517 0.5kb upstream 0.5kb upstream 500 false Bd4: 47150678-47151177 Brachypodium distachyon
Bradi4g43517 0.5kb downstream 0.5kb downstream 16081 true Bd4: 47134597-47150677 Brachypodium distachyon
Bradi4g43517 0.5kb downstream 0.5kb downstream 500 false Bd4: 47134597-47135096 Brachypodium distachyon
Bradi4g43517 1.0kb upstream 1.0kb upstream 16581 true Bd4: 47135097-47151677 Brachypodium distachyon
Bradi4g43517 1.0kb upstream 1.0kb upstream 1000 false Bd4: 47150678-47151677 Brachypodium distachyon
Bradi4g43517 1.0kb downstream 1.0kb downstream 16581 true Bd4: 47134097-47150677 Brachypodium distachyon
Bradi4g43517 1.0kb downstream 1.0kb downstream 1000 false Bd4: 47134097-47135096 Brachypodium distachyon
Bradi4g43517 2.0kb upstream 2.0kb upstream 17581 true Bd4: 47135097-47152677 Brachypodium distachyon
Bradi4g43517 2.0kb upstream 2.0kb upstream 2000 false Bd4: 47150678-47152677 Brachypodium distachyon
Bradi4g43517 2.0kb downstream 2.0kb downstream 17581 true Bd4: 47133097-47150677 Brachypodium distachyon
Bradi4g43517 2.0kb downstream 2.0kb downstream 2000 false Bd4: 47133097-47135096 Brachypodium distachyon
Bradi4g43517 5.0kb upstream 5.0kb upstream 20581 true Bd4: 47135097-47155677 Brachypodium distachyon
Bradi4g43517 5.0kb upstream 5.0kb upstream 5000 false Bd4: 47150678-47155677 Brachypodium distachyon
Bradi4g43517 5.0kb downstream 5.0kb downstream 20581 true Bd4: 47130097-47150677 Brachypodium distachyon
Bradi4g43517 5.0kb downstream 5.0kb downstream 5000 false Bd4: 47130097-47135096 Brachypodium distachyon
Bradi4g43517 10.0kb upstream 10.0kb upstream 25581 true Bd4: 47135097-47160677 Brachypodium distachyon
Bradi4g43517 10.0kb upstream 10.0kb upstream 10000 false Bd4: 47150678-47160677 Brachypodium distachyon
Bradi4g43517 10.0kb downstream 10.0kb downstream 25581 true Bd4: 47125097-47150677 Brachypodium distachyon
Bradi4g43517 10.0kb downstream 10.0kb downstream 10000 false Bd4: 47125097-47135096 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124578735 5269 Grass View MSA
122042594 5273 Angiosperm View MSA
121344548 5274 Embryophyte View MSA
123425052 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.003        
cufflinks 4.712       High
cufflinks 4.551       High
cufflinks 2.842        
cufflinks 0.954       Low
cufflinks 3.412        
cufflinks 3.562        
cufflinks 2.616        
cufflinks 3.097        
cufflinks 2.529        
cufflinks 3.518        
cufflinks 3.438        
cufflinks 3.223        
cufflinks 2.44        
cufflinks 1.687        
cufflinks 3.76        
cufflinks 1.58       Low
cufflinks 5.207       High
cufflinks 2.803        
cufflinks 1.506       Low
cufflinks 1.776        
cufflinks 5.176       High
cufflinks 2.681        
cufflinks 2.422        
cufflinks 2.393        
cufflinks 4.015        
cufflinks 3.966        
cufflinks 4.111        
cufflinks 4.165        
cufflinks 2.697        

0 Strain