Gene : Bradi4g44336 B. distachyon v3.1
Defline:  (1 of 7) 3.2.1.78 - Mannan endo-1,4-beta-mannosidase / Endo-1,4-mannanase Genomic Order:  5716
Name:  ? Bradi4g44336 Secondary Identifier:  ? PAC:32786979
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g44336 0.5kb upstream 0.5kb upstream 3141 true Bd4: 47720245-47723385 Brachypodium distachyon
Bradi4g44336 0.5kb upstream 0.5kb upstream 500 false Bd4: 47720245-47720744 Brachypodium distachyon
Bradi4g44336 0.5kb downstream 0.5kb downstream 3141 true Bd4: 47720745-47723885 Brachypodium distachyon
Bradi4g44336 0.5kb downstream 0.5kb downstream 500 false Bd4: 47723386-47723885 Brachypodium distachyon
Bradi4g44336 1.0kb upstream 1.0kb upstream 3641 true Bd4: 47719745-47723385 Brachypodium distachyon
Bradi4g44336 1.0kb upstream 1.0kb upstream 1000 false Bd4: 47719745-47720744 Brachypodium distachyon
Bradi4g44336 1.0kb downstream 1.0kb downstream 3641 true Bd4: 47720745-47724385 Brachypodium distachyon
Bradi4g44336 1.0kb downstream 1.0kb downstream 1000 false Bd4: 47723386-47724385 Brachypodium distachyon
Bradi4g44336 2.0kb upstream 2.0kb upstream 4641 true Bd4: 47718745-47723385 Brachypodium distachyon
Bradi4g44336 2.0kb upstream 2.0kb upstream 2000 false Bd4: 47718745-47720744 Brachypodium distachyon
Bradi4g44336 2.0kb downstream 2.0kb downstream 4641 true Bd4: 47720745-47725385 Brachypodium distachyon
Bradi4g44336 2.0kb downstream 2.0kb downstream 2000 false Bd4: 47723386-47725385 Brachypodium distachyon
Bradi4g44336 5.0kb upstream 5.0kb upstream 7641 true Bd4: 47715745-47723385 Brachypodium distachyon
Bradi4g44336 5.0kb upstream 5.0kb upstream 5000 false Bd4: 47715745-47720744 Brachypodium distachyon
Bradi4g44336 5.0kb downstream 5.0kb downstream 7641 true Bd4: 47720745-47728385 Brachypodium distachyon
Bradi4g44336 5.0kb downstream 5.0kb downstream 5000 false Bd4: 47723386-47728385 Brachypodium distachyon
Bradi4g44336 10.0kb upstream 10.0kb upstream 12641 true Bd4: 47710745-47723385 Brachypodium distachyon
Bradi4g44336 10.0kb upstream 10.0kb upstream 10000 false Bd4: 47710745-47720744 Brachypodium distachyon
Bradi4g44336 10.0kb downstream 10.0kb downstream 12641 true Bd4: 47720745-47733385 Brachypodium distachyon
Bradi4g44336 10.0kb downstream 10.0kb downstream 10000 false Bd4: 47723386-47733385 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124587789 5269 Grass View MSA
122051044 5273 Angiosperm View MSA
121348976 5274 Embryophyte View MSA
123428551 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.928        
cufflinks 1.157        
cufflinks 0.958        
cufflinks 1.357        
cufflinks 3.225       High
cufflinks 0.729        
cufflinks 0.892        
cufflinks 0.685        
cufflinks 0.611        
cufflinks 0.792        
cufflinks 0.083       Low
cufflinks 0.722        
cufflinks 0.075       Low
cufflinks 0.041     Low Low
cufflinks 1.275        
cufflinks 0.809        
cufflinks 1.311        
cufflinks 10.958       High
cufflinks 1.868        
cufflinks 0.79        
cufflinks 0.978        
cufflinks 0.6        
cufflinks 0.614        
cufflinks 0.614        
cufflinks 0.741        
cufflinks 1.419        
cufflinks 0.046     Low Low
cufflinks 1.196        
cufflinks 0.728        
cufflinks 1.241        

0 Strain