Gene : Bradi2g42100 B. distachyon v3.1
Defline:  (1 of 1) K02146 - V-type H+-transporting ATPase subunit d (ATPeV0D, ATP6D) Genomic Order:  5038
Name:  ? Bradi2g42100 Secondary Identifier:  ? PAC:32781898
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g42100 0.5kb upstream 0.5kb upstream 6303 true Bd2: 42349887-42356189 Brachypodium distachyon
Bradi2g42100 0.5kb upstream 0.5kb upstream 500 false Bd2: 42355690-42356189 Brachypodium distachyon
Bradi2g42100 0.5kb downstream 0.5kb downstream 6303 true Bd2: 42349387-42355689 Brachypodium distachyon
Bradi2g42100 0.5kb downstream 0.5kb downstream 500 false Bd2: 42349387-42349886 Brachypodium distachyon
Bradi2g42100 1.0kb upstream 1.0kb upstream 6803 true Bd2: 42349887-42356689 Brachypodium distachyon
Bradi2g42100 1.0kb upstream 1.0kb upstream 1000 false Bd2: 42355690-42356689 Brachypodium distachyon
Bradi2g42100 1.0kb downstream 1.0kb downstream 6803 true Bd2: 42348887-42355689 Brachypodium distachyon
Bradi2g42100 1.0kb downstream 1.0kb downstream 1000 false Bd2: 42348887-42349886 Brachypodium distachyon
Bradi2g42100 2.0kb upstream 2.0kb upstream 7803 true Bd2: 42349887-42357689 Brachypodium distachyon
Bradi2g42100 2.0kb upstream 2.0kb upstream 2000 false Bd2: 42355690-42357689 Brachypodium distachyon
Bradi2g42100 2.0kb downstream 2.0kb downstream 7803 true Bd2: 42347887-42355689 Brachypodium distachyon
Bradi2g42100 2.0kb downstream 2.0kb downstream 2000 false Bd2: 42347887-42349886 Brachypodium distachyon
Bradi2g42100 5.0kb upstream 5.0kb upstream 10803 true Bd2: 42349887-42360689 Brachypodium distachyon
Bradi2g42100 5.0kb upstream 5.0kb upstream 5000 false Bd2: 42355690-42360689 Brachypodium distachyon
Bradi2g42100 5.0kb downstream 5.0kb downstream 10803 true Bd2: 42344887-42355689 Brachypodium distachyon
Bradi2g42100 5.0kb downstream 5.0kb downstream 5000 false Bd2: 42344887-42349886 Brachypodium distachyon
Bradi2g42100 10.0kb upstream 10.0kb upstream 15803 true Bd2: 42349887-42365689 Brachypodium distachyon
Bradi2g42100 10.0kb upstream 10.0kb upstream 10000 false Bd2: 42355690-42365689 Brachypodium distachyon
Bradi2g42100 10.0kb downstream 10.0kb downstream 15803 true Bd2: 42339887-42355689 Brachypodium distachyon
Bradi2g42100 10.0kb downstream 10.0kb downstream 10000 false Bd2: 42339887-42349886 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124576896 5269 Grass View MSA
122045239 5273 Angiosperm View MSA
121345158 5274 Embryophyte View MSA
123427776 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.763     High  
cufflinks 33.185     High  
cufflinks 24.007     High  
cufflinks 30.305     High  
cufflinks 25.449     High  
cufflinks 34.367     High  
cufflinks 34.565     High  
cufflinks 21.667     High Low
cufflinks 28.306     High  
cufflinks 19.852     High Low
cufflinks 21.986     High  
cufflinks 29.352     High  
cufflinks 27.217     High  
cufflinks 23.101     High  
cufflinks 24.668     High  
cufflinks 33.771     High  
cufflinks 30.49     High  
cufflinks 40.507     High High
cufflinks 31.386     High  
cufflinks 27.229     High  
cufflinks 42.466     High High
cufflinks 20.82     High Low
cufflinks 21.596     High Low
cufflinks 31.108     High  
cufflinks 33.399     High  
cufflinks 25.359     High  
cufflinks 28.25     High  
cufflinks 23.689     High  
cufflinks 21.631     High Low
cufflinks 40.621     High High

0 Strain