Gene : Bradi2g47850 B. distachyon v3.1
Defline:  (1 of 3) K02218 - casein kinase 1 (CSNK1, CK1) Genomic Order:  5750
Name:  ? Bradi2g47850 Secondary Identifier:  ? PAC:32776024
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g47850 0.5kb upstream 0.5kb upstream 6165 true Bd2: 47992180-47998344 Brachypodium distachyon
Bradi2g47850 0.5kb upstream 0.5kb upstream 500 false Bd2: 47992180-47992679 Brachypodium distachyon
Bradi2g47850 0.5kb downstream 0.5kb downstream 6165 true Bd2: 47992680-47998844 Brachypodium distachyon
Bradi2g47850 0.5kb downstream 0.5kb downstream 500 false Bd2: 47998345-47998844 Brachypodium distachyon
Bradi2g47850 1.0kb upstream 1.0kb upstream 6665 true Bd2: 47991680-47998344 Brachypodium distachyon
Bradi2g47850 1.0kb upstream 1.0kb upstream 1000 false Bd2: 47991680-47992679 Brachypodium distachyon
Bradi2g47850 1.0kb downstream 1.0kb downstream 6665 true Bd2: 47992680-47999344 Brachypodium distachyon
Bradi2g47850 1.0kb downstream 1.0kb downstream 1000 false Bd2: 47998345-47999344 Brachypodium distachyon
Bradi2g47850 2.0kb upstream 2.0kb upstream 7665 true Bd2: 47990680-47998344 Brachypodium distachyon
Bradi2g47850 2.0kb upstream 2.0kb upstream 2000 false Bd2: 47990680-47992679 Brachypodium distachyon
Bradi2g47850 2.0kb downstream 2.0kb downstream 7665 true Bd2: 47992680-48000344 Brachypodium distachyon
Bradi2g47850 2.0kb downstream 2.0kb downstream 2000 false Bd2: 47998345-48000344 Brachypodium distachyon
Bradi2g47850 5.0kb upstream 5.0kb upstream 10665 true Bd2: 47987680-47998344 Brachypodium distachyon
Bradi2g47850 5.0kb upstream 5.0kb upstream 5000 false Bd2: 47987680-47992679 Brachypodium distachyon
Bradi2g47850 5.0kb downstream 5.0kb downstream 10665 true Bd2: 47992680-48003344 Brachypodium distachyon
Bradi2g47850 5.0kb downstream 5.0kb downstream 5000 false Bd2: 47998345-48003344 Brachypodium distachyon
Bradi2g47850 10.0kb upstream 10.0kb upstream 15665 true Bd2: 47982680-47998344 Brachypodium distachyon
Bradi2g47850 10.0kb upstream 10.0kb upstream 10000 false Bd2: 47982680-47992679 Brachypodium distachyon
Bradi2g47850 10.0kb downstream 10.0kb downstream 15665 true Bd2: 47992680-48008344 Brachypodium distachyon
Bradi2g47850 10.0kb downstream 10.0kb downstream 10000 false Bd2: 47998345-48008344 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124576167 5269 Grass View MSA
122046132 5273 Angiosperm View MSA
121344009 5274 Embryophyte View MSA
123427595 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.448     High  
cufflinks 28.591     High  
cufflinks 22.872     High  
cufflinks 20.357     High  
cufflinks 11.203     High Low
cufflinks 23.699     High  
cufflinks 28.065     High  
cufflinks 10.877     High Low
cufflinks 16.414     High  
cufflinks 13.49     High  
cufflinks 22.375     High  
cufflinks 18.515     High  
cufflinks 19.707     High  
cufflinks 18.336     High  
cufflinks 11.863     High Low
cufflinks 24.042     High  
cufflinks 17.261     High  
cufflinks 41.356     High High
cufflinks 23.286     High  
cufflinks 23.102     High  
cufflinks 21.627     High  
cufflinks 16.72     High  
cufflinks 10.8     High Low
cufflinks 15.708     High  
cufflinks 21.306     High  
cufflinks 21.074     High  
cufflinks 25.546     High  
cufflinks 20.013     High  
cufflinks 16.489     High  
cufflinks 24.923     High  

0 Strain