Gene : Bradi4g09648 B. distachyon v3.1
Defline:  (1 of 2) KOG4585 - Predicted transposase Genomic Order:  1293
Name:  ? Bradi4g09648 Secondary Identifier:  ? PAC:32786441
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g09648 0.5kb upstream 0.5kb upstream 15967 true Bd4: 9104264-9120230 Brachypodium distachyon
Bradi4g09648 0.5kb upstream 0.5kb upstream 500 false Bd4: 9119731-9120230 Brachypodium distachyon
Bradi4g09648 0.5kb downstream 0.5kb downstream 15967 true Bd4: 9103764-9119730 Brachypodium distachyon
Bradi4g09648 0.5kb downstream 0.5kb downstream 500 false Bd4: 9103764-9104263 Brachypodium distachyon
Bradi4g09648 1.0kb upstream 1.0kb upstream 16467 true Bd4: 9104264-9120730 Brachypodium distachyon
Bradi4g09648 1.0kb upstream 1.0kb upstream 1000 false Bd4: 9119731-9120730 Brachypodium distachyon
Bradi4g09648 1.0kb downstream 1.0kb downstream 16467 true Bd4: 9103264-9119730 Brachypodium distachyon
Bradi4g09648 1.0kb downstream 1.0kb downstream 1000 false Bd4: 9103264-9104263 Brachypodium distachyon
Bradi4g09648 2.0kb upstream 2.0kb upstream 17467 true Bd4: 9104264-9121730 Brachypodium distachyon
Bradi4g09648 2.0kb upstream 2.0kb upstream 2000 false Bd4: 9119731-9121730 Brachypodium distachyon
Bradi4g09648 2.0kb downstream 2.0kb downstream 17467 true Bd4: 9102264-9119730 Brachypodium distachyon
Bradi4g09648 2.0kb downstream 2.0kb downstream 2000 false Bd4: 9102264-9104263 Brachypodium distachyon
Bradi4g09648 5.0kb upstream 5.0kb upstream 20467 true Bd4: 9104264-9124730 Brachypodium distachyon
Bradi4g09648 5.0kb upstream 5.0kb upstream 5000 false Bd4: 9119731-9124730 Brachypodium distachyon
Bradi4g09648 5.0kb downstream 5.0kb downstream 20467 true Bd4: 9099264-9119730 Brachypodium distachyon
Bradi4g09648 5.0kb downstream 5.0kb downstream 5000 false Bd4: 9099264-9104263 Brachypodium distachyon
Bradi4g09648 10.0kb upstream 10.0kb upstream 25467 true Bd4: 9104264-9129730 Brachypodium distachyon
Bradi4g09648 10.0kb upstream 10.0kb upstream 10000 false Bd4: 9119731-9129730 Brachypodium distachyon
Bradi4g09648 10.0kb downstream 10.0kb downstream 25467 true Bd4: 9094264-9119730 Brachypodium distachyon
Bradi4g09648 10.0kb downstream 10.0kb downstream 10000 false Bd4: 9094264-9104263 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121972233 5273 Angiosperm View MSA
124545982 5269 Grass View MSA
121242708 5274 Embryophyte View MSA
123281495 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.032     Low High
cufflinks 0.015     Low  
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low  
cufflinks 0.012     Low  
cufflinks 0.005     Low  
cufflinks 0.013     Low  
cufflinks 0.002     Low Low
cufflinks 0.002     Low Low
cufflinks 0.003     Low  
cufflinks 0.011     Low  
cufflinks 0.003     Low  
cufflinks 0.002     Low Low
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.098     Low High
cufflinks 0.013     Low  
cufflinks 0.036     Low High
cufflinks 0.006     Low  
cufflinks 0.022     Low  
cufflinks 0.006     Low  
cufflinks 0.006     Low  
cufflinks 0.016     Low  
cufflinks 0.027     Low High
cufflinks 0.002     Low Low
cufflinks 0.024     Low High
cufflinks 0.013     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain