Gene : Bradi2g45740 B. distachyon v3.1
Defline:  (1 of 2) PTHR10093 - IRON-SULFUR CLUSTER ASSEMBLY ENZYME NIFU HOMOLOG Genomic Order:  5472
Name:  ? Bradi2g45740 Secondary Identifier:  ? PAC:32776831
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g45740 0.5kb upstream 0.5kb upstream 3648 true Bd2: 45949348-45952995 Brachypodium distachyon
Bradi2g45740 0.5kb upstream 0.5kb upstream 500 false Bd2: 45952496-45952995 Brachypodium distachyon
Bradi2g45740 0.5kb downstream 0.5kb downstream 3648 true Bd2: 45948848-45952495 Brachypodium distachyon
Bradi2g45740 0.5kb downstream 0.5kb downstream 500 false Bd2: 45948848-45949347 Brachypodium distachyon
Bradi2g45740 1.0kb upstream 1.0kb upstream 4148 true Bd2: 45949348-45953495 Brachypodium distachyon
Bradi2g45740 1.0kb upstream 1.0kb upstream 1000 false Bd2: 45952496-45953495 Brachypodium distachyon
Bradi2g45740 1.0kb downstream 1.0kb downstream 4148 true Bd2: 45948348-45952495 Brachypodium distachyon
Bradi2g45740 1.0kb downstream 1.0kb downstream 1000 false Bd2: 45948348-45949347 Brachypodium distachyon
Bradi2g45740 2.0kb upstream 2.0kb upstream 5148 true Bd2: 45949348-45954495 Brachypodium distachyon
Bradi2g45740 2.0kb upstream 2.0kb upstream 2000 false Bd2: 45952496-45954495 Brachypodium distachyon
Bradi2g45740 2.0kb downstream 2.0kb downstream 5148 true Bd2: 45947348-45952495 Brachypodium distachyon
Bradi2g45740 2.0kb downstream 2.0kb downstream 2000 false Bd2: 45947348-45949347 Brachypodium distachyon
Bradi2g45740 5.0kb upstream 5.0kb upstream 8148 true Bd2: 45949348-45957495 Brachypodium distachyon
Bradi2g45740 5.0kb upstream 5.0kb upstream 5000 false Bd2: 45952496-45957495 Brachypodium distachyon
Bradi2g45740 5.0kb downstream 5.0kb downstream 8148 true Bd2: 45944348-45952495 Brachypodium distachyon
Bradi2g45740 5.0kb downstream 5.0kb downstream 5000 false Bd2: 45944348-45949347 Brachypodium distachyon
Bradi2g45740 10.0kb upstream 10.0kb upstream 13148 true Bd2: 45949348-45962495 Brachypodium distachyon
Bradi2g45740 10.0kb upstream 10.0kb upstream 10000 false Bd2: 45952496-45962495 Brachypodium distachyon
Bradi2g45740 10.0kb downstream 10.0kb downstream 13148 true Bd2: 45939348-45952495 Brachypodium distachyon
Bradi2g45740 10.0kb downstream 10.0kb downstream 10000 false Bd2: 45939348-45949347 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026522 5273 Angiosperm View MSA
124581152 5269 Grass View MSA
121348454 5274 Embryophyte View MSA
123428131 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 92.956     High  
cufflinks 33.115     High Low
cufflinks 42.792     High  
cufflinks 54.371     High  
cufflinks 114.116     High  
cufflinks 45.52     High  
cufflinks 41.821     High  
cufflinks 50.751     High  
cufflinks 52.264     High  
cufflinks 110.57     High  
cufflinks 79.463     High  
cufflinks 36.354     High Low
cufflinks 62.721     High  
cufflinks 82.565     High  
cufflinks 98.375     High  
cufflinks 38.044     High Low
cufflinks 112.75     High  
cufflinks 32.636     High Low
cufflinks 78.36     High  
cufflinks 315.752     High High
cufflinks 80.031     High  
cufflinks 47.455     High  
cufflinks 60.602     High  
cufflinks 57.913     High  
cufflinks 69.987     High  
cufflinks 68.669     High  
cufflinks 83.297     High  
cufflinks 89.02     High  
cufflinks 85.97     High  
cufflinks 35.528     High Low

0 Strain