Gene : Bradi2g46580 B. distachyon v3.1

Defline:  (1 of 2) KOG0402 - 60S ribosomal protein L37 Genomic Order:  5583
Name:  ? Bradi2g46580 Secondary Identifier:  ? PAC:32777408

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g46580 0.5kb upstream 0.5kb upstream 3141 true Bd2: 46779419-46782559 Brachypodium distachyon
Bradi2g46580 0.5kb upstream 0.5kb upstream 500 false Bd2: 46782060-46782559 Brachypodium distachyon
Bradi2g46580 0.5kb downstream 0.5kb downstream 3141 true Bd2: 46778919-46782059 Brachypodium distachyon
Bradi2g46580 0.5kb downstream 0.5kb downstream 500 false Bd2: 46778919-46779418 Brachypodium distachyon
Bradi2g46580 1.0kb upstream 1.0kb upstream 3641 true Bd2: 46779419-46783059 Brachypodium distachyon
Bradi2g46580 1.0kb upstream 1.0kb upstream 1000 false Bd2: 46782060-46783059 Brachypodium distachyon
Bradi2g46580 1.0kb downstream 1.0kb downstream 3641 true Bd2: 46778419-46782059 Brachypodium distachyon
Bradi2g46580 1.0kb downstream 1.0kb downstream 1000 false Bd2: 46778419-46779418 Brachypodium distachyon
Bradi2g46580 2.0kb upstream 2.0kb upstream 4641 true Bd2: 46779419-46784059 Brachypodium distachyon
Bradi2g46580 2.0kb upstream 2.0kb upstream 2000 false Bd2: 46782060-46784059 Brachypodium distachyon
Bradi2g46580 2.0kb downstream 2.0kb downstream 4641 true Bd2: 46777419-46782059 Brachypodium distachyon
Bradi2g46580 2.0kb downstream 2.0kb downstream 2000 false Bd2: 46777419-46779418 Brachypodium distachyon
Bradi2g46580 5.0kb upstream 5.0kb upstream 7641 true Bd2: 46779419-46787059 Brachypodium distachyon
Bradi2g46580 5.0kb upstream 5.0kb upstream 5000 false Bd2: 46782060-46787059 Brachypodium distachyon
Bradi2g46580 5.0kb downstream 5.0kb downstream 7641 true Bd2: 46774419-46782059 Brachypodium distachyon
Bradi2g46580 5.0kb downstream 5.0kb downstream 5000 false Bd2: 46774419-46779418 Brachypodium distachyon
Bradi2g46580 10.0kb upstream 10.0kb upstream 12641 true Bd2: 46779419-46792059 Brachypodium distachyon
Bradi2g46580 10.0kb upstream 10.0kb upstream 10000 false Bd2: 46782060-46792059 Brachypodium distachyon
Bradi2g46580 10.0kb downstream 10.0kb downstream 12641 true Bd2: 46769419-46782059 Brachypodium distachyon
Bradi2g46580 10.0kb downstream 10.0kb downstream 10000 false Bd2: 46769419-46779418 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124589189 5269 Grass View MSA
122042071 5273 Angiosperm View MSA
121350230 5274 Embryophyte View MSA
123426457 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 155.554     High  
cufflinks 99.045     High  
cufflinks 89.609     High  
cufflinks 161.874     High  
cufflinks 173.057     High  
cufflinks 97.467     High  
cufflinks 95.102     High  
cufflinks 80.608     High  
cufflinks 84.015     High  
cufflinks 205.31     High  
cufflinks 23.499     High Low
cufflinks 71.107     High  
cufflinks 16.653     High Low
cufflinks 24.629     High Low
cufflinks 85.184     High  
cufflinks 84.918     High  
cufflinks 200.54     High  
cufflinks 137.679     High  
cufflinks 189.583     High  
cufflinks 259.264     High High
cufflinks 188.516     High  
cufflinks 73.343     High  
cufflinks 75.85     High  
cufflinks 78.99     High  
cufflinks 124.534     High  
cufflinks 165.076     High  
cufflinks 21.174     High Low
cufflinks 141.701     High  
cufflinks 131.854     High  
cufflinks 155.306     High  

0 Strain