Gene : Bradi2g46610 B. distachyon v3.1
Defline:  (1 of 1) PF04719 - hTAFII28-like protein conserved region (TAFII28) Genomic Order:  5586
Name:  ? Bradi2g46610 Secondary Identifier:  ? PAC:32780241
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g46610 0.5kb upstream 0.5kb upstream 3492 true Bd2: 46805973-46809464 Brachypodium distachyon
Bradi2g46610 0.5kb upstream 0.5kb upstream 500 false Bd2: 46805973-46806472 Brachypodium distachyon
Bradi2g46610 0.5kb downstream 0.5kb downstream 3492 true Bd2: 46806473-46809964 Brachypodium distachyon
Bradi2g46610 0.5kb downstream 0.5kb downstream 500 false Bd2: 46809465-46809964 Brachypodium distachyon
Bradi2g46610 1.0kb upstream 1.0kb upstream 3992 true Bd2: 46805473-46809464 Brachypodium distachyon
Bradi2g46610 1.0kb upstream 1.0kb upstream 1000 false Bd2: 46805473-46806472 Brachypodium distachyon
Bradi2g46610 1.0kb downstream 1.0kb downstream 3992 true Bd2: 46806473-46810464 Brachypodium distachyon
Bradi2g46610 1.0kb downstream 1.0kb downstream 1000 false Bd2: 46809465-46810464 Brachypodium distachyon
Bradi2g46610 2.0kb upstream 2.0kb upstream 4992 true Bd2: 46804473-46809464 Brachypodium distachyon
Bradi2g46610 2.0kb upstream 2.0kb upstream 2000 false Bd2: 46804473-46806472 Brachypodium distachyon
Bradi2g46610 2.0kb downstream 2.0kb downstream 4992 true Bd2: 46806473-46811464 Brachypodium distachyon
Bradi2g46610 2.0kb downstream 2.0kb downstream 2000 false Bd2: 46809465-46811464 Brachypodium distachyon
Bradi2g46610 5.0kb upstream 5.0kb upstream 7992 true Bd2: 46801473-46809464 Brachypodium distachyon
Bradi2g46610 5.0kb upstream 5.0kb upstream 5000 false Bd2: 46801473-46806472 Brachypodium distachyon
Bradi2g46610 5.0kb downstream 5.0kb downstream 7992 true Bd2: 46806473-46814464 Brachypodium distachyon
Bradi2g46610 5.0kb downstream 5.0kb downstream 5000 false Bd2: 46809465-46814464 Brachypodium distachyon
Bradi2g46610 10.0kb upstream 10.0kb upstream 12992 true Bd2: 46796473-46809464 Brachypodium distachyon
Bradi2g46610 10.0kb upstream 10.0kb upstream 10000 false Bd2: 46796473-46806472 Brachypodium distachyon
Bradi2g46610 10.0kb downstream 10.0kb downstream 12992 true Bd2: 46806473-46819464 Brachypodium distachyon
Bradi2g46610 10.0kb downstream 10.0kb downstream 10000 false Bd2: 46809465-46819464 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577429 5269 Grass View MSA
122046222 5273 Angiosperm View MSA
121348235 5274 Embryophyte View MSA
123426477 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.121        
cufflinks 3.219        
cufflinks 3.66        
cufflinks 4.414        
cufflinks 3.743        
cufflinks 3.475        
cufflinks 3.705        
cufflinks 3.464        
cufflinks 2.804       Low
cufflinks 7.065       High
cufflinks 3.268        
cufflinks 2.926       Low
cufflinks 2.555       Low
cufflinks 2.906       Low
cufflinks 2.682       Low
cufflinks 3.282        
cufflinks 8.109       High
cufflinks 4.955        
cufflinks 8.19       High
cufflinks 9.276       High
cufflinks 8.603       High
cufflinks 5.092        
cufflinks 3.792        
cufflinks 3.661        
cufflinks 4.537        
cufflinks 5.446        
cufflinks 3.789        
cufflinks 5.593        
cufflinks 5.561        
cufflinks 4.453        

0 Strain