Gene : Bradi2g46830 B. distachyon v3.1
Defline:  (1 of 1) PTHR12843:SF5 - METHYLTRANSFERASE-LIKE PROTEIN 10 Genomic Order:  5617
Name:  ? Bradi2g46830 Secondary Identifier:  ? PAC:32781875
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g46830 0.5kb upstream 0.5kb upstream 7861 true Bd2: 47036743-47044603 Brachypodium distachyon
Bradi2g46830 0.5kb upstream 0.5kb upstream 500 false Bd2: 47036743-47037242 Brachypodium distachyon
Bradi2g46830 0.5kb downstream 0.5kb downstream 7861 true Bd2: 47037243-47045103 Brachypodium distachyon
Bradi2g46830 0.5kb downstream 0.5kb downstream 500 false Bd2: 47044604-47045103 Brachypodium distachyon
Bradi2g46830 1.0kb upstream 1.0kb upstream 8361 true Bd2: 47036243-47044603 Brachypodium distachyon
Bradi2g46830 1.0kb upstream 1.0kb upstream 1000 false Bd2: 47036243-47037242 Brachypodium distachyon
Bradi2g46830 1.0kb downstream 1.0kb downstream 8361 true Bd2: 47037243-47045603 Brachypodium distachyon
Bradi2g46830 1.0kb downstream 1.0kb downstream 1000 false Bd2: 47044604-47045603 Brachypodium distachyon
Bradi2g46830 2.0kb upstream 2.0kb upstream 9361 true Bd2: 47035243-47044603 Brachypodium distachyon
Bradi2g46830 2.0kb upstream 2.0kb upstream 2000 false Bd2: 47035243-47037242 Brachypodium distachyon
Bradi2g46830 2.0kb downstream 2.0kb downstream 9361 true Bd2: 47037243-47046603 Brachypodium distachyon
Bradi2g46830 2.0kb downstream 2.0kb downstream 2000 false Bd2: 47044604-47046603 Brachypodium distachyon
Bradi2g46830 5.0kb upstream 5.0kb upstream 12361 true Bd2: 47032243-47044603 Brachypodium distachyon
Bradi2g46830 5.0kb upstream 5.0kb upstream 5000 false Bd2: 47032243-47037242 Brachypodium distachyon
Bradi2g46830 5.0kb downstream 5.0kb downstream 12361 true Bd2: 47037243-47049603 Brachypodium distachyon
Bradi2g46830 5.0kb downstream 5.0kb downstream 5000 false Bd2: 47044604-47049603 Brachypodium distachyon
Bradi2g46830 10.0kb upstream 10.0kb upstream 17361 true Bd2: 47027243-47044603 Brachypodium distachyon
Bradi2g46830 10.0kb upstream 10.0kb upstream 10000 false Bd2: 47027243-47037242 Brachypodium distachyon
Bradi2g46830 10.0kb downstream 10.0kb downstream 17361 true Bd2: 47037243-47054603 Brachypodium distachyon
Bradi2g46830 10.0kb downstream 10.0kb downstream 10000 false Bd2: 47044604-47054603 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124589264 5269 Grass View MSA
122041744 5273 Angiosperm View MSA
121347606 5274 Embryophyte View MSA
123380579 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.605        
cufflinks 0.632        
cufflinks 0.587        
cufflinks 0.668        
cufflinks 0.506        
cufflinks 0.573        
cufflinks 0.601        
cufflinks 0.604        
cufflinks 0.6        
cufflinks 0.691        
cufflinks 0.183       Low
cufflinks 0.502        
cufflinks 0.187       Low
cufflinks 0.181       Low
cufflinks 0.401        
cufflinks 0.618        
cufflinks 0.867        
cufflinks 1.498       High
cufflinks 0.859        
cufflinks 0.51        
cufflinks 1.221       High
cufflinks 0.517        
cufflinks 0.55        
cufflinks 0.528        
cufflinks 0.626        
cufflinks 0.667        
cufflinks 0.302       Low
cufflinks 0.578        
cufflinks 0.535        
cufflinks 0.996       High

0 Strain