Gene : Bradi2g46870 B. distachyon v3.1
Defline:  (1 of 2) PTHR23079:SF1 - PROTEIN RRF-3 Genomic Order:  5622
Name:  ? Bradi2g46870 Secondary Identifier:  ? PAC:32778996
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g46870 0.5kb upstream 0.5kb upstream 6084 true Bd2: 47067335-47073418 Brachypodium distachyon
Bradi2g46870 0.5kb upstream 0.5kb upstream 500 false Bd2: 47072919-47073418 Brachypodium distachyon
Bradi2g46870 0.5kb downstream 0.5kb downstream 6084 true Bd2: 47066835-47072918 Brachypodium distachyon
Bradi2g46870 0.5kb downstream 0.5kb downstream 500 false Bd2: 47066835-47067334 Brachypodium distachyon
Bradi2g46870 1.0kb upstream 1.0kb upstream 6584 true Bd2: 47067335-47073918 Brachypodium distachyon
Bradi2g46870 1.0kb upstream 1.0kb upstream 1000 false Bd2: 47072919-47073918 Brachypodium distachyon
Bradi2g46870 1.0kb downstream 1.0kb downstream 6584 true Bd2: 47066335-47072918 Brachypodium distachyon
Bradi2g46870 1.0kb downstream 1.0kb downstream 1000 false Bd2: 47066335-47067334 Brachypodium distachyon
Bradi2g46870 2.0kb upstream 2.0kb upstream 7584 true Bd2: 47067335-47074918 Brachypodium distachyon
Bradi2g46870 2.0kb upstream 2.0kb upstream 2000 false Bd2: 47072919-47074918 Brachypodium distachyon
Bradi2g46870 2.0kb downstream 2.0kb downstream 7584 true Bd2: 47065335-47072918 Brachypodium distachyon
Bradi2g46870 2.0kb downstream 2.0kb downstream 2000 false Bd2: 47065335-47067334 Brachypodium distachyon
Bradi2g46870 5.0kb upstream 5.0kb upstream 10584 true Bd2: 47067335-47077918 Brachypodium distachyon
Bradi2g46870 5.0kb upstream 5.0kb upstream 5000 false Bd2: 47072919-47077918 Brachypodium distachyon
Bradi2g46870 5.0kb downstream 5.0kb downstream 10584 true Bd2: 47062335-47072918 Brachypodium distachyon
Bradi2g46870 5.0kb downstream 5.0kb downstream 5000 false Bd2: 47062335-47067334 Brachypodium distachyon
Bradi2g46870 10.0kb upstream 10.0kb upstream 15584 true Bd2: 47067335-47082918 Brachypodium distachyon
Bradi2g46870 10.0kb upstream 10.0kb upstream 10000 false Bd2: 47072919-47082918 Brachypodium distachyon
Bradi2g46870 10.0kb downstream 10.0kb downstream 15584 true Bd2: 47057335-47072918 Brachypodium distachyon
Bradi2g46870 10.0kb downstream 10.0kb downstream 10000 false Bd2: 47057335-47067334 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124588153 5269 Grass View MSA
122045596 5273 Angiosperm View MSA
121346387 5274 Embryophyte View MSA
123428546 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.436        
cufflinks 0.503        
cufflinks 0.655        
cufflinks 0.419        
cufflinks 0.304       Low
cufflinks 0.598        
cufflinks 0.487        
cufflinks 0.675        
cufflinks 0.642        
cufflinks 0.58        
cufflinks 0.447        
cufflinks 0.659        
cufflinks 0.398        
cufflinks 0.284       Low
cufflinks 0.445        
cufflinks 0.523        
cufflinks 0.418        
cufflinks 0.939       High
cufflinks 0.488        
cufflinks 0.177       Low
cufflinks 0.626        
cufflinks 0.761        
cufflinks 0.608        
cufflinks 0.566        
cufflinks 0.453        
cufflinks 0.57        
cufflinks 0.48        
cufflinks 0.796       High
cufflinks 0.565        
cufflinks 0.977       High

0 Strain