Gene : Bradi4g19010 B. distachyon v3.1
Defline:  (1 of 2) PTHR12506//PTHR12506:SF25 - PROTEIN PHOSPHATASE RELATED // SUBFAMILY NOT NAMED Genomic Order:  2464
Name:  ? Bradi4g19010 Secondary Identifier:  ? PAC:32790484
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g19010 0.5kb upstream 0.5kb upstream 14414 true Bd4: 21539524-21553937 Brachypodium distachyon
Bradi4g19010 0.5kb upstream 0.5kb upstream 500 false Bd4: 21553438-21553937 Brachypodium distachyon
Bradi4g19010 0.5kb downstream 0.5kb downstream 14414 true Bd4: 21539024-21553437 Brachypodium distachyon
Bradi4g19010 0.5kb downstream 0.5kb downstream 500 false Bd4: 21539024-21539523 Brachypodium distachyon
Bradi4g19010 1.0kb upstream 1.0kb upstream 14914 true Bd4: 21539524-21554437 Brachypodium distachyon
Bradi4g19010 1.0kb upstream 1.0kb upstream 1000 false Bd4: 21553438-21554437 Brachypodium distachyon
Bradi4g19010 1.0kb downstream 1.0kb downstream 14914 true Bd4: 21538524-21553437 Brachypodium distachyon
Bradi4g19010 1.0kb downstream 1.0kb downstream 1000 false Bd4: 21538524-21539523 Brachypodium distachyon
Bradi4g19010 2.0kb upstream 2.0kb upstream 15914 true Bd4: 21539524-21555437 Brachypodium distachyon
Bradi4g19010 2.0kb upstream 2.0kb upstream 2000 false Bd4: 21553438-21555437 Brachypodium distachyon
Bradi4g19010 2.0kb downstream 2.0kb downstream 15914 true Bd4: 21537524-21553437 Brachypodium distachyon
Bradi4g19010 2.0kb downstream 2.0kb downstream 2000 false Bd4: 21537524-21539523 Brachypodium distachyon
Bradi4g19010 5.0kb upstream 5.0kb upstream 18914 true Bd4: 21539524-21558437 Brachypodium distachyon
Bradi4g19010 5.0kb upstream 5.0kb upstream 5000 false Bd4: 21553438-21558437 Brachypodium distachyon
Bradi4g19010 5.0kb downstream 5.0kb downstream 18914 true Bd4: 21534524-21553437 Brachypodium distachyon
Bradi4g19010 5.0kb downstream 5.0kb downstream 5000 false Bd4: 21534524-21539523 Brachypodium distachyon
Bradi4g19010 10.0kb upstream 10.0kb upstream 23914 true Bd4: 21539524-21563437 Brachypodium distachyon
Bradi4g19010 10.0kb upstream 10.0kb upstream 10000 false Bd4: 21553438-21563437 Brachypodium distachyon
Bradi4g19010 10.0kb downstream 10.0kb downstream 23914 true Bd4: 21529524-21553437 Brachypodium distachyon
Bradi4g19010 10.0kb downstream 10.0kb downstream 10000 false Bd4: 21529524-21539523 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124574800 5269 Grass View MSA
122047416 5273 Angiosperm View MSA
121348027 5274 Embryophyte View MSA
123428726 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.203        
cufflinks 4.553        
cufflinks 4.801        
cufflinks 5.102        
cufflinks 4.726        
cufflinks 5.963        
cufflinks 4.927        
cufflinks 6.83        
cufflinks 6.228        
cufflinks 5.2        
cufflinks 7.415        
cufflinks 5.239        
cufflinks 9.137     High High
cufflinks 9.299     High High
cufflinks 7.85       High
cufflinks 5.314        
cufflinks 6.623        
cufflinks 2.296       Low
cufflinks 3.803        
cufflinks 3.53       Low
cufflinks 3.932        
cufflinks 5.315        
cufflinks 6.196        
cufflinks 6.811        
cufflinks 5.758        
cufflinks 5.175        
cufflinks 10.812     High High
cufflinks 5.328        
cufflinks 5.456        
cufflinks 3.065       Low

0 Strain