Gene : Bradi2g52187 B. distachyon v3.1
Defline:  (1 of 2) 2.7.8.5 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase / Phosphatidylglycerophosphate synthase Genomic Order:  6272
Name:  ? Bradi2g52187 Secondary Identifier:  ? PAC:32781428
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY4FS-7 Brachypodium distachyon pathologic  
Bdistachyon PWY-5269 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g52187 0.5kb upstream 0.5kb upstream 4349 true Bd2: 51428982-51433330 Brachypodium distachyon
Bradi2g52187 0.5kb upstream 0.5kb upstream 500 false Bd2: 51432831-51433330 Brachypodium distachyon
Bradi2g52187 0.5kb downstream 0.5kb downstream 4349 true Bd2: 51428482-51432830 Brachypodium distachyon
Bradi2g52187 0.5kb downstream 0.5kb downstream 500 false Bd2: 51428482-51428981 Brachypodium distachyon
Bradi2g52187 1.0kb upstream 1.0kb upstream 4849 true Bd2: 51428982-51433830 Brachypodium distachyon
Bradi2g52187 1.0kb upstream 1.0kb upstream 1000 false Bd2: 51432831-51433830 Brachypodium distachyon
Bradi2g52187 1.0kb downstream 1.0kb downstream 4849 true Bd2: 51427982-51432830 Brachypodium distachyon
Bradi2g52187 1.0kb downstream 1.0kb downstream 1000 false Bd2: 51427982-51428981 Brachypodium distachyon
Bradi2g52187 2.0kb upstream 2.0kb upstream 5849 true Bd2: 51428982-51434830 Brachypodium distachyon
Bradi2g52187 2.0kb upstream 2.0kb upstream 2000 false Bd2: 51432831-51434830 Brachypodium distachyon
Bradi2g52187 2.0kb downstream 2.0kb downstream 5849 true Bd2: 51426982-51432830 Brachypodium distachyon
Bradi2g52187 2.0kb downstream 2.0kb downstream 2000 false Bd2: 51426982-51428981 Brachypodium distachyon
Bradi2g52187 5.0kb upstream 5.0kb upstream 8849 true Bd2: 51428982-51437830 Brachypodium distachyon
Bradi2g52187 5.0kb upstream 5.0kb upstream 5000 false Bd2: 51432831-51437830 Brachypodium distachyon
Bradi2g52187 5.0kb downstream 5.0kb downstream 8849 true Bd2: 51423982-51432830 Brachypodium distachyon
Bradi2g52187 5.0kb downstream 5.0kb downstream 5000 false Bd2: 51423982-51428981 Brachypodium distachyon
Bradi2g52187 10.0kb upstream 10.0kb upstream 13849 true Bd2: 51428982-51442830 Brachypodium distachyon
Bradi2g52187 10.0kb upstream 10.0kb upstream 10000 false Bd2: 51432831-51442830 Brachypodium distachyon
Bradi2g52187 10.0kb downstream 10.0kb downstream 13849 true Bd2: 51418982-51432830 Brachypodium distachyon
Bradi2g52187 10.0kb downstream 10.0kb downstream 10000 false Bd2: 51418982-51428981 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041507 5273 Angiosperm View MSA
124575796 5269 Grass View MSA
121347843 5274 Embryophyte View MSA
123423962 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.489        
cufflinks 0.782        
cufflinks 0.627        
cufflinks 0.718        
cufflinks 0.285        
cufflinks 0.661        
cufflinks 0.64        
cufflinks 0.546        
cufflinks 0.598        
cufflinks 0.519        
cufflinks 0.284        
cufflinks 0.532        
cufflinks 0.248       Low
cufflinks 0.307        
cufflinks 0.254       Low
cufflinks 0.615        
cufflinks 0.54        
cufflinks 1.057       High
cufflinks 0.508        
cufflinks 0.015     Low Low
cufflinks 0.514        
cufflinks 0.437        
cufflinks 0.46        
cufflinks 0.533        
cufflinks 0.622        
cufflinks 0.492        
cufflinks 0.362        
cufflinks 0.525        
cufflinks 0.47        
cufflinks 0.705        

0 Strain