Gene : Bradi2g52710 B. distachyon v3.1
Defline:  (1 of 2) PTHR14503:SF3 - 50S RIBOSOMAL PROTEIN L34, CHLOROPLASTIC Genomic Order:  6338
Name:  ? Bradi2g52710 Secondary Identifier:  ? PAC:32778989
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g52710 0.5kb upstream 0.5kb upstream 2413 true Bd2: 51795622-51798034 Brachypodium distachyon
Bradi2g52710 0.5kb upstream 0.5kb upstream 500 false Bd2: 51797535-51798034 Brachypodium distachyon
Bradi2g52710 0.5kb downstream 0.5kb downstream 2413 true Bd2: 51795122-51797534 Brachypodium distachyon
Bradi2g52710 0.5kb downstream 0.5kb downstream 500 false Bd2: 51795122-51795621 Brachypodium distachyon
Bradi2g52710 1.0kb upstream 1.0kb upstream 2913 true Bd2: 51795622-51798534 Brachypodium distachyon
Bradi2g52710 1.0kb upstream 1.0kb upstream 1000 false Bd2: 51797535-51798534 Brachypodium distachyon
Bradi2g52710 1.0kb downstream 1.0kb downstream 2913 true Bd2: 51794622-51797534 Brachypodium distachyon
Bradi2g52710 1.0kb downstream 1.0kb downstream 1000 false Bd2: 51794622-51795621 Brachypodium distachyon
Bradi2g52710 2.0kb upstream 2.0kb upstream 3913 true Bd2: 51795622-51799534 Brachypodium distachyon
Bradi2g52710 2.0kb upstream 2.0kb upstream 2000 false Bd2: 51797535-51799534 Brachypodium distachyon
Bradi2g52710 2.0kb downstream 2.0kb downstream 3913 true Bd2: 51793622-51797534 Brachypodium distachyon
Bradi2g52710 2.0kb downstream 2.0kb downstream 2000 false Bd2: 51793622-51795621 Brachypodium distachyon
Bradi2g52710 5.0kb upstream 5.0kb upstream 6913 true Bd2: 51795622-51802534 Brachypodium distachyon
Bradi2g52710 5.0kb upstream 5.0kb upstream 5000 false Bd2: 51797535-51802534 Brachypodium distachyon
Bradi2g52710 5.0kb downstream 5.0kb downstream 6913 true Bd2: 51790622-51797534 Brachypodium distachyon
Bradi2g52710 5.0kb downstream 5.0kb downstream 5000 false Bd2: 51790622-51795621 Brachypodium distachyon
Bradi2g52710 10.0kb upstream 10.0kb upstream 11913 true Bd2: 51795622-51807534 Brachypodium distachyon
Bradi2g52710 10.0kb upstream 10.0kb upstream 10000 false Bd2: 51797535-51807534 Brachypodium distachyon
Bradi2g52710 10.0kb downstream 10.0kb downstream 11913 true Bd2: 51785622-51797534 Brachypodium distachyon
Bradi2g52710 10.0kb downstream 10.0kb downstream 10000 false Bd2: 51785622-51795621 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124588773 5269 Grass View MSA
122044582 5273 Angiosperm View MSA
121344313 5274 Embryophyte View MSA
123425891 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 73.314     High  
cufflinks 61.553     High  
cufflinks 53.414     High  
cufflinks 70.985     High  
cufflinks 63.063     High  
cufflinks 50.501     High  
cufflinks 63.631     High  
cufflinks 51.287     High  
cufflinks 46.248     High  
cufflinks 77.91     High  
cufflinks 23.587     High  
cufflinks 44.003     High  
cufflinks 27.62     High  
cufflinks 29.046     High  
cufflinks 58.829     High  
cufflinks 57.791     High  
cufflinks 80.739     High  
cufflinks 3.974       Low
cufflinks 61.975     High  
cufflinks 11.594     High Low
cufflinks 33.591     High  
cufflinks 49.502     High  
cufflinks 43.325     High  
cufflinks 43.759     High  
cufflinks 54.047     High  
cufflinks 59.968     High  
cufflinks 16.681     High Low
cufflinks 55.352     High  
cufflinks 51.858     High  
cufflinks 56.391     High  

0 Strain