Gene : Bradi2g54120 B. distachyon v3.1
Defline:  (1 of 1) PTHR12210//PTHR12210:SF68 - NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED // SUBFAMILY NOT NAMED Genomic Order:  6508
Name:  ? Bradi2g54120 Secondary Identifier:  ? PAC:32780972
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g54120 0.5kb upstream 0.5kb upstream 4322 true Bd2: 52860689-52865010 Brachypodium distachyon
Bradi2g54120 0.5kb upstream 0.5kb upstream 500 false Bd2: 52864511-52865010 Brachypodium distachyon
Bradi2g54120 0.5kb downstream 0.5kb downstream 4322 true Bd2: 52860189-52864510 Brachypodium distachyon
Bradi2g54120 0.5kb downstream 0.5kb downstream 500 false Bd2: 52860189-52860688 Brachypodium distachyon
Bradi2g54120 1.0kb upstream 1.0kb upstream 4822 true Bd2: 52860689-52865510 Brachypodium distachyon
Bradi2g54120 1.0kb upstream 1.0kb upstream 1000 false Bd2: 52864511-52865510 Brachypodium distachyon
Bradi2g54120 1.0kb downstream 1.0kb downstream 4822 true Bd2: 52859689-52864510 Brachypodium distachyon
Bradi2g54120 1.0kb downstream 1.0kb downstream 1000 false Bd2: 52859689-52860688 Brachypodium distachyon
Bradi2g54120 2.0kb upstream 2.0kb upstream 5822 true Bd2: 52860689-52866510 Brachypodium distachyon
Bradi2g54120 2.0kb upstream 2.0kb upstream 2000 false Bd2: 52864511-52866510 Brachypodium distachyon
Bradi2g54120 2.0kb downstream 2.0kb downstream 5822 true Bd2: 52858689-52864510 Brachypodium distachyon
Bradi2g54120 2.0kb downstream 2.0kb downstream 2000 false Bd2: 52858689-52860688 Brachypodium distachyon
Bradi2g54120 5.0kb upstream 5.0kb upstream 8822 true Bd2: 52860689-52869510 Brachypodium distachyon
Bradi2g54120 5.0kb upstream 5.0kb upstream 5000 false Bd2: 52864511-52869510 Brachypodium distachyon
Bradi2g54120 5.0kb downstream 5.0kb downstream 8822 true Bd2: 52855689-52864510 Brachypodium distachyon
Bradi2g54120 5.0kb downstream 5.0kb downstream 5000 false Bd2: 52855689-52860688 Brachypodium distachyon
Bradi2g54120 10.0kb upstream 10.0kb upstream 13822 true Bd2: 52860689-52874510 Brachypodium distachyon
Bradi2g54120 10.0kb upstream 10.0kb upstream 10000 false Bd2: 52864511-52874510 Brachypodium distachyon
Bradi2g54120 10.0kb downstream 10.0kb downstream 13822 true Bd2: 52850689-52864510 Brachypodium distachyon
Bradi2g54120 10.0kb downstream 10.0kb downstream 10000 false Bd2: 52850689-52860688 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124578665 5269 Grass View MSA
122050524 5273 Angiosperm View MSA
123429149 5275 Viridiplantae View MSA
121311967 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.496       Low
cufflinks 7.812       Low
cufflinks 14.55     High  
cufflinks 8.824       Low
cufflinks 9.751     High  
cufflinks 8.833       Low
cufflinks 8.119       Low
cufflinks 9.863     High  
cufflinks 9.014       Low
cufflinks 20.112     High High
cufflinks 23.36     High High
cufflinks 11.209     High  
cufflinks 13.955     High  
cufflinks 16.922     High  
cufflinks 10.516     High  
cufflinks 10.288     High  
cufflinks 13.618     High  
cufflinks 11.604     High  
cufflinks 15.865     High  
cufflinks 19.502     High High
cufflinks 15.615     High  
cufflinks 20.579     High High
cufflinks 10.356     High  
cufflinks 9.84     High  
cufflinks 9.215       Low
cufflinks 19.568     High High
cufflinks 19.131     High High
cufflinks 21.271     High High
cufflinks 19.017     High High
cufflinks 10.343        

0 Strain