Gene : Bradi2g49980 B. distachyon v3.1
Defline:  (1 of 4) PF06454 - Protein of unknown function (DUF1084) (DUF1084) Genomic Order:  6001
Name:  ? Bradi2g49980 Secondary Identifier:  ? PAC:32771111
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g49980 0.5kb upstream 0.5kb upstream 9017 true Bd2: 49732807-49741823 Brachypodium distachyon
Bradi2g49980 0.5kb upstream 0.5kb upstream 500 false Bd2: 49732807-49733306 Brachypodium distachyon
Bradi2g49980 0.5kb downstream 0.5kb downstream 9017 true Bd2: 49733307-49742323 Brachypodium distachyon
Bradi2g49980 0.5kb downstream 0.5kb downstream 500 false Bd2: 49741824-49742323 Brachypodium distachyon
Bradi2g49980 1.0kb upstream 1.0kb upstream 9517 true Bd2: 49732307-49741823 Brachypodium distachyon
Bradi2g49980 1.0kb upstream 1.0kb upstream 1000 false Bd2: 49732307-49733306 Brachypodium distachyon
Bradi2g49980 1.0kb downstream 1.0kb downstream 9517 true Bd2: 49733307-49742823 Brachypodium distachyon
Bradi2g49980 1.0kb downstream 1.0kb downstream 1000 false Bd2: 49741824-49742823 Brachypodium distachyon
Bradi2g49980 2.0kb upstream 2.0kb upstream 10517 true Bd2: 49731307-49741823 Brachypodium distachyon
Bradi2g49980 2.0kb upstream 2.0kb upstream 2000 false Bd2: 49731307-49733306 Brachypodium distachyon
Bradi2g49980 2.0kb downstream 2.0kb downstream 10517 true Bd2: 49733307-49743823 Brachypodium distachyon
Bradi2g49980 2.0kb downstream 2.0kb downstream 2000 false Bd2: 49741824-49743823 Brachypodium distachyon
Bradi2g49980 5.0kb upstream 5.0kb upstream 13517 true Bd2: 49728307-49741823 Brachypodium distachyon
Bradi2g49980 5.0kb upstream 5.0kb upstream 5000 false Bd2: 49728307-49733306 Brachypodium distachyon
Bradi2g49980 5.0kb downstream 5.0kb downstream 13517 true Bd2: 49733307-49746823 Brachypodium distachyon
Bradi2g49980 5.0kb downstream 5.0kb downstream 5000 false Bd2: 49741824-49746823 Brachypodium distachyon
Bradi2g49980 10.0kb upstream 10.0kb upstream 18517 true Bd2: 49723307-49741823 Brachypodium distachyon
Bradi2g49980 10.0kb upstream 10.0kb upstream 10000 false Bd2: 49723307-49733306 Brachypodium distachyon
Bradi2g49980 10.0kb downstream 10.0kb downstream 18517 true Bd2: 49733307-49751823 Brachypodium distachyon
Bradi2g49980 10.0kb downstream 10.0kb downstream 10000 false Bd2: 49741824-49751823 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124580441 5269 Grass View MSA
122046976 5273 Angiosperm View MSA
121346361 5274 Embryophyte View MSA
123380372 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.913        
cufflinks 3.149        
cufflinks 3.151        
cufflinks 3.097        
cufflinks 1.792       Low
cufflinks 2.673        
cufflinks 2.677        
cufflinks 2.833        
cufflinks 2.627        
cufflinks 2.704        
cufflinks 2.737        
cufflinks 2.449        
cufflinks 2.904        
cufflinks 2.773        
cufflinks 2.175        
cufflinks 2.853        
cufflinks 3.366        
cufflinks 3.418        
cufflinks 4.637       High
cufflinks 1.732       Low
cufflinks 3.693        
cufflinks 3.459        
cufflinks 2.79        
cufflinks 2.809        
cufflinks 3.043        
cufflinks 3.528        
cufflinks 3.812       High
cufflinks 3.321        
cufflinks 3.398        
cufflinks 3.081        

0 Strain