Gene : Bradi2g50340 B. distachyon v3.1
Defline:  (1 of 1) K03509 - DNA polymerase eta (POLH) Genomic Order:  6049
Name:  ? Bradi2g50340 Secondary Identifier:  ? PAC:32779943
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g50340 0.5kb upstream 0.5kb upstream 6645 true Bd2: 50025297-50031941 Brachypodium distachyon
Bradi2g50340 0.5kb upstream 0.5kb upstream 500 false Bd2: 50025297-50025796 Brachypodium distachyon
Bradi2g50340 0.5kb downstream 0.5kb downstream 6645 true Bd2: 50025797-50032441 Brachypodium distachyon
Bradi2g50340 0.5kb downstream 0.5kb downstream 500 false Bd2: 50031942-50032441 Brachypodium distachyon
Bradi2g50340 1.0kb upstream 1.0kb upstream 7145 true Bd2: 50024797-50031941 Brachypodium distachyon
Bradi2g50340 1.0kb upstream 1.0kb upstream 1000 false Bd2: 50024797-50025796 Brachypodium distachyon
Bradi2g50340 1.0kb downstream 1.0kb downstream 7145 true Bd2: 50025797-50032941 Brachypodium distachyon
Bradi2g50340 1.0kb downstream 1.0kb downstream 1000 false Bd2: 50031942-50032941 Brachypodium distachyon
Bradi2g50340 2.0kb upstream 2.0kb upstream 8145 true Bd2: 50023797-50031941 Brachypodium distachyon
Bradi2g50340 2.0kb upstream 2.0kb upstream 2000 false Bd2: 50023797-50025796 Brachypodium distachyon
Bradi2g50340 2.0kb downstream 2.0kb downstream 8145 true Bd2: 50025797-50033941 Brachypodium distachyon
Bradi2g50340 2.0kb downstream 2.0kb downstream 2000 false Bd2: 50031942-50033941 Brachypodium distachyon
Bradi2g50340 5.0kb upstream 5.0kb upstream 11145 true Bd2: 50020797-50031941 Brachypodium distachyon
Bradi2g50340 5.0kb upstream 5.0kb upstream 5000 false Bd2: 50020797-50025796 Brachypodium distachyon
Bradi2g50340 5.0kb downstream 5.0kb downstream 11145 true Bd2: 50025797-50036941 Brachypodium distachyon
Bradi2g50340 5.0kb downstream 5.0kb downstream 5000 false Bd2: 50031942-50036941 Brachypodium distachyon
Bradi2g50340 10.0kb upstream 10.0kb upstream 16145 true Bd2: 50015797-50031941 Brachypodium distachyon
Bradi2g50340 10.0kb upstream 10.0kb upstream 10000 false Bd2: 50015797-50025796 Brachypodium distachyon
Bradi2g50340 10.0kb downstream 10.0kb downstream 16145 true Bd2: 50025797-50041941 Brachypodium distachyon
Bradi2g50340 10.0kb downstream 10.0kb downstream 10000 false Bd2: 50031942-50041941 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124570530 5269 Grass View MSA
122044511 5273 Angiosperm View MSA
121345231 5274 Embryophyte View MSA
123428686 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.96        
cufflinks 2.929        
cufflinks 4.702       High
cufflinks 2.882        
cufflinks 1.503       Low
cufflinks 2.831        
cufflinks 2.899        
cufflinks 2.812        
cufflinks 3.18        
cufflinks 4.025        
cufflinks 4.356        
cufflinks 3.119        
cufflinks 2.823        
cufflinks 2.964        
cufflinks 1.908        
cufflinks 2.723        
cufflinks 2.745        
cufflinks 3.533        
cufflinks 3.708        
cufflinks 0.955       Low
cufflinks 2.969        
cufflinks 5.472       High
cufflinks 2.923        
cufflinks 2.702        
cufflinks 2.392        
cufflinks 4.649       High
cufflinks 4.27        
cufflinks 5.221       High
cufflinks 4.664       High
cufflinks 3.014        

0 Strain