Gene : Bradi2g50890 B. distachyon v3.1
Defline:  (1 of 1) PTHR21494//PTHR21494:SF0//PTHR24012 - ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 ASC-1 COMPLEX SUBUNIT P100 // ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 // FAMILY NOT NAMED Genomic Order:  6110
Name:  ? Bradi2g50890 Secondary Identifier:  ? PAC:32780936
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g50890 0.5kb upstream 0.5kb upstream 12896 true Bd2: 50375857-50388752 Brachypodium distachyon
Bradi2g50890 0.5kb upstream 0.5kb upstream 500 false Bd2: 50375857-50376356 Brachypodium distachyon
Bradi2g50890 0.5kb downstream 0.5kb downstream 12896 true Bd2: 50376357-50389252 Brachypodium distachyon
Bradi2g50890 0.5kb downstream 0.5kb downstream 500 false Bd2: 50388753-50389252 Brachypodium distachyon
Bradi2g50890 1.0kb upstream 1.0kb upstream 13396 true Bd2: 50375357-50388752 Brachypodium distachyon
Bradi2g50890 1.0kb upstream 1.0kb upstream 1000 false Bd2: 50375357-50376356 Brachypodium distachyon
Bradi2g50890 1.0kb downstream 1.0kb downstream 13396 true Bd2: 50376357-50389752 Brachypodium distachyon
Bradi2g50890 1.0kb downstream 1.0kb downstream 1000 false Bd2: 50388753-50389752 Brachypodium distachyon
Bradi2g50890 2.0kb upstream 2.0kb upstream 14396 true Bd2: 50374357-50388752 Brachypodium distachyon
Bradi2g50890 2.0kb upstream 2.0kb upstream 2000 false Bd2: 50374357-50376356 Brachypodium distachyon
Bradi2g50890 2.0kb downstream 2.0kb downstream 14396 true Bd2: 50376357-50390752 Brachypodium distachyon
Bradi2g50890 2.0kb downstream 2.0kb downstream 2000 false Bd2: 50388753-50390752 Brachypodium distachyon
Bradi2g50890 5.0kb upstream 5.0kb upstream 17396 true Bd2: 50371357-50388752 Brachypodium distachyon
Bradi2g50890 5.0kb upstream 5.0kb upstream 5000 false Bd2: 50371357-50376356 Brachypodium distachyon
Bradi2g50890 5.0kb downstream 5.0kb downstream 17396 true Bd2: 50376357-50393752 Brachypodium distachyon
Bradi2g50890 5.0kb downstream 5.0kb downstream 5000 false Bd2: 50388753-50393752 Brachypodium distachyon
Bradi2g50890 10.0kb upstream 10.0kb upstream 22396 true Bd2: 50366357-50388752 Brachypodium distachyon
Bradi2g50890 10.0kb upstream 10.0kb upstream 10000 false Bd2: 50366357-50376356 Brachypodium distachyon
Bradi2g50890 10.0kb downstream 10.0kb downstream 22396 true Bd2: 50376357-50398752 Brachypodium distachyon
Bradi2g50890 10.0kb downstream 10.0kb downstream 10000 false Bd2: 50388753-50398752 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124579026 5269 Grass View MSA
122043099 5273 Angiosperm View MSA
121349744 5274 Embryophyte View MSA
123381424 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.733        
cufflinks 1.345        
cufflinks 1.482        
cufflinks 0.814        
cufflinks 0.399       Low
cufflinks 1.289        
cufflinks 1.264        
cufflinks 1.169        
cufflinks 1.247        
cufflinks 0.762        
cufflinks 1.481        
cufflinks 1.5        
cufflinks 1.369        
cufflinks 1.029        
cufflinks 0.623        
cufflinks 1.518        
cufflinks 0.613        
cufflinks 1.974       High
cufflinks 0.835        
cufflinks 0.274       Low
cufflinks 0.623        
cufflinks 1.67        
cufflinks 1.168        
cufflinks 0.977        
cufflinks 0.828        
cufflinks 1.277        
cufflinks 1.338        
cufflinks 1.184        
cufflinks 1.236        
cufflinks 1.253        

0 Strain