Gene : Bradi2g51017 B. distachyon v3.1
Defline:  (1 of 1) PTHR18934:SF115 - NUCLEAR DEIH-BOXHELICASE-RELATED Genomic Order:  6128
Name:  ? Bradi2g51017 Secondary Identifier:  ? PAC:32782366
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g51017 0.5kb upstream 0.5kb upstream 10598 true Bd2: 50466647-50477244 Brachypodium distachyon
Bradi2g51017 0.5kb upstream 0.5kb upstream 500 false Bd2: 50466647-50467146 Brachypodium distachyon
Bradi2g51017 0.5kb downstream 0.5kb downstream 10598 true Bd2: 50467147-50477744 Brachypodium distachyon
Bradi2g51017 0.5kb downstream 0.5kb downstream 500 false Bd2: 50477245-50477744 Brachypodium distachyon
Bradi2g51017 1.0kb upstream 1.0kb upstream 11098 true Bd2: 50466147-50477244 Brachypodium distachyon
Bradi2g51017 1.0kb upstream 1.0kb upstream 1000 false Bd2: 50466147-50467146 Brachypodium distachyon
Bradi2g51017 1.0kb downstream 1.0kb downstream 11098 true Bd2: 50467147-50478244 Brachypodium distachyon
Bradi2g51017 1.0kb downstream 1.0kb downstream 1000 false Bd2: 50477245-50478244 Brachypodium distachyon
Bradi2g51017 2.0kb upstream 2.0kb upstream 12098 true Bd2: 50465147-50477244 Brachypodium distachyon
Bradi2g51017 2.0kb upstream 2.0kb upstream 2000 false Bd2: 50465147-50467146 Brachypodium distachyon
Bradi2g51017 2.0kb downstream 2.0kb downstream 12098 true Bd2: 50467147-50479244 Brachypodium distachyon
Bradi2g51017 2.0kb downstream 2.0kb downstream 2000 false Bd2: 50477245-50479244 Brachypodium distachyon
Bradi2g51017 5.0kb upstream 5.0kb upstream 15098 true Bd2: 50462147-50477244 Brachypodium distachyon
Bradi2g51017 5.0kb upstream 5.0kb upstream 5000 false Bd2: 50462147-50467146 Brachypodium distachyon
Bradi2g51017 5.0kb downstream 5.0kb downstream 15098 true Bd2: 50467147-50482244 Brachypodium distachyon
Bradi2g51017 5.0kb downstream 5.0kb downstream 5000 false Bd2: 50477245-50482244 Brachypodium distachyon
Bradi2g51017 10.0kb upstream 10.0kb upstream 20098 true Bd2: 50457147-50477244 Brachypodium distachyon
Bradi2g51017 10.0kb upstream 10.0kb upstream 10000 false Bd2: 50457147-50467146 Brachypodium distachyon
Bradi2g51017 10.0kb downstream 10.0kb downstream 20098 true Bd2: 50467147-50487244 Brachypodium distachyon
Bradi2g51017 10.0kb downstream 10.0kb downstream 10000 false Bd2: 50477245-50487244 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124571191 5269 Grass View MSA
122041609 5273 Angiosperm View MSA
121344795 5274 Embryophyte View MSA
123427408 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.851        
cufflinks 5.494        
cufflinks 5.905        
cufflinks 4.322        
cufflinks 2.318       Low
cufflinks 5.321        
cufflinks 4.628        
cufflinks 4.628        
cufflinks 5.221        
cufflinks 3.874        
cufflinks 7.029       High
cufflinks 5.737        
cufflinks 5.171        
cufflinks 4.929        
cufflinks 3.25        
cufflinks 5.605        
cufflinks 2.725       Low
cufflinks 7.957       High
cufflinks 2.636       Low
cufflinks 3.24        
cufflinks 3.249        
cufflinks 6.807       High
cufflinks 4.486        
cufflinks 4.372        
cufflinks 4.258        
cufflinks 4.977        
cufflinks 5.119        
cufflinks 4.76        
cufflinks 4.868        
cufflinks 4.711        

0 Strain