Gene : Bradi4g18870 B. distachyon v3.1
Defline:  (1 of 1) KOG2014 - SMT3/SUMO-activating complex, AOS1/RAD31 component Genomic Order:  2448
Name:  ? Bradi4g18870 Secondary Identifier:  ? PAC:32786338
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g18870 0.5kb upstream 0.5kb upstream 8787 true Bd4: 21317507-21326293 Brachypodium distachyon
Bradi4g18870 0.5kb upstream 0.5kb upstream 500 false Bd4: 21325794-21326293 Brachypodium distachyon
Bradi4g18870 0.5kb downstream 0.5kb downstream 8787 true Bd4: 21317007-21325793 Brachypodium distachyon
Bradi4g18870 0.5kb downstream 0.5kb downstream 500 false Bd4: 21317007-21317506 Brachypodium distachyon
Bradi4g18870 1.0kb upstream 1.0kb upstream 9287 true Bd4: 21317507-21326793 Brachypodium distachyon
Bradi4g18870 1.0kb upstream 1.0kb upstream 1000 false Bd4: 21325794-21326793 Brachypodium distachyon
Bradi4g18870 1.0kb downstream 1.0kb downstream 9287 true Bd4: 21316507-21325793 Brachypodium distachyon
Bradi4g18870 1.0kb downstream 1.0kb downstream 1000 false Bd4: 21316507-21317506 Brachypodium distachyon
Bradi4g18870 2.0kb upstream 2.0kb upstream 10287 true Bd4: 21317507-21327793 Brachypodium distachyon
Bradi4g18870 2.0kb upstream 2.0kb upstream 2000 false Bd4: 21325794-21327793 Brachypodium distachyon
Bradi4g18870 2.0kb downstream 2.0kb downstream 10287 true Bd4: 21315507-21325793 Brachypodium distachyon
Bradi4g18870 2.0kb downstream 2.0kb downstream 2000 false Bd4: 21315507-21317506 Brachypodium distachyon
Bradi4g18870 5.0kb upstream 5.0kb upstream 13287 true Bd4: 21317507-21330793 Brachypodium distachyon
Bradi4g18870 5.0kb upstream 5.0kb upstream 5000 false Bd4: 21325794-21330793 Brachypodium distachyon
Bradi4g18870 5.0kb downstream 5.0kb downstream 13287 true Bd4: 21312507-21325793 Brachypodium distachyon
Bradi4g18870 5.0kb downstream 5.0kb downstream 5000 false Bd4: 21312507-21317506 Brachypodium distachyon
Bradi4g18870 10.0kb upstream 10.0kb upstream 18287 true Bd4: 21317507-21335793 Brachypodium distachyon
Bradi4g18870 10.0kb upstream 10.0kb upstream 10000 false Bd4: 21325794-21335793 Brachypodium distachyon
Bradi4g18870 10.0kb downstream 10.0kb downstream 18287 true Bd4: 21307507-21325793 Brachypodium distachyon
Bradi4g18870 10.0kb downstream 10.0kb downstream 10000 false Bd4: 21307507-21317506 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041218 5273 Angiosperm View MSA
124573638 5269 Grass View MSA
121348552 5274 Embryophyte View MSA
123424130 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.335        
cufflinks 3.347        
cufflinks 2.942        
cufflinks 3.461        
cufflinks 2.668        
cufflinks 3.324        
cufflinks 3.184        
cufflinks 2.819        
cufflinks 3.28        
cufflinks 2.443        
cufflinks 2.779        
cufflinks 2.657        
cufflinks 2.379       Low
cufflinks 2.726        
cufflinks 2.543        
cufflinks 3.022        
cufflinks 4.96       High
cufflinks 5.13       High
cufflinks 5.247       High
cufflinks 1.375       Low
cufflinks 5.057       High
cufflinks 2.797        
cufflinks 2.913        
cufflinks 3.421        
cufflinks 3.832        
cufflinks 2.982        
cufflinks 3.497        
cufflinks 2.813        
cufflinks 2.77        
cufflinks 3.931        

0 Strain