Gene : Bradi2g51550 B. distachyon v3.1
Defline:  (1 of 2) KOG2659 - LisH motif-containing protein Genomic Order:  6193
Name:  ? Bradi2g51550 Secondary Identifier:  ? PAC:32779717
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g51550 0.5kb upstream 0.5kb upstream 4269 true Bd2: 50920548-50924816 Brachypodium distachyon
Bradi2g51550 0.5kb upstream 0.5kb upstream 500 false Bd2: 50924317-50924816 Brachypodium distachyon
Bradi2g51550 0.5kb downstream 0.5kb downstream 4269 true Bd2: 50920048-50924316 Brachypodium distachyon
Bradi2g51550 0.5kb downstream 0.5kb downstream 500 false Bd2: 50920048-50920547 Brachypodium distachyon
Bradi2g51550 1.0kb upstream 1.0kb upstream 4769 true Bd2: 50920548-50925316 Brachypodium distachyon
Bradi2g51550 1.0kb upstream 1.0kb upstream 1000 false Bd2: 50924317-50925316 Brachypodium distachyon
Bradi2g51550 1.0kb downstream 1.0kb downstream 4769 true Bd2: 50919548-50924316 Brachypodium distachyon
Bradi2g51550 1.0kb downstream 1.0kb downstream 1000 false Bd2: 50919548-50920547 Brachypodium distachyon
Bradi2g51550 2.0kb upstream 2.0kb upstream 5769 true Bd2: 50920548-50926316 Brachypodium distachyon
Bradi2g51550 2.0kb upstream 2.0kb upstream 2000 false Bd2: 50924317-50926316 Brachypodium distachyon
Bradi2g51550 2.0kb downstream 2.0kb downstream 5769 true Bd2: 50918548-50924316 Brachypodium distachyon
Bradi2g51550 2.0kb downstream 2.0kb downstream 2000 false Bd2: 50918548-50920547 Brachypodium distachyon
Bradi2g51550 5.0kb upstream 5.0kb upstream 8769 true Bd2: 50920548-50929316 Brachypodium distachyon
Bradi2g51550 5.0kb upstream 5.0kb upstream 5000 false Bd2: 50924317-50929316 Brachypodium distachyon
Bradi2g51550 5.0kb downstream 5.0kb downstream 8769 true Bd2: 50915548-50924316 Brachypodium distachyon
Bradi2g51550 5.0kb downstream 5.0kb downstream 5000 false Bd2: 50915548-50920547 Brachypodium distachyon
Bradi2g51550 10.0kb upstream 10.0kb upstream 13769 true Bd2: 50920548-50934316 Brachypodium distachyon
Bradi2g51550 10.0kb upstream 10.0kb upstream 10000 false Bd2: 50924317-50934316 Brachypodium distachyon
Bradi2g51550 10.0kb downstream 10.0kb downstream 13769 true Bd2: 50910548-50924316 Brachypodium distachyon
Bradi2g51550 10.0kb downstream 10.0kb downstream 10000 false Bd2: 50910548-50920547 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124579354 5269 Grass View MSA
122047349 5273 Angiosperm View MSA
121347103 5274 Embryophyte View MSA
123424554 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.714        
cufflinks 4.31        
cufflinks 3.913        
cufflinks 3.834        
cufflinks 3.273        
cufflinks 3.403        
cufflinks 3.666        
cufflinks 4.922        
cufflinks 3.878        
cufflinks 3.12        
cufflinks 2.738        
cufflinks 4.692        
cufflinks 2.366       Low
cufflinks 2.524       Low
cufflinks 4.01        
cufflinks 3.381        
cufflinks 4.316        
cufflinks 5.764       High
cufflinks 4.818        
cufflinks 1.986       Low
cufflinks 4.666        
cufflinks 4.1        
cufflinks 5.257        
cufflinks 3.773        
cufflinks 3.891        
cufflinks 4.482        
cufflinks 2.983        
cufflinks 3.719        
cufflinks 3.863        
cufflinks 4.627        

0 Strain