Gene : Bradi2g56710 B. distachyon v3.1
Defline:  (1 of 1) PTHR15856//PTHR15856:SF29 - PHD FINGER PROTEIN 20-RELATED // SUBFAMILY NOT NAMED Genomic Order:  6823
Name:  ? Bradi2g56710 Secondary Identifier:  ? PAC:32771053
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g56710 0.5kb upstream 0.5kb upstream 4400 true Bd2: 54776188-54780587 Brachypodium distachyon
Bradi2g56710 0.5kb upstream 0.5kb upstream 500 false Bd2: 54776188-54776687 Brachypodium distachyon
Bradi2g56710 0.5kb downstream 0.5kb downstream 4400 true Bd2: 54776688-54781087 Brachypodium distachyon
Bradi2g56710 0.5kb downstream 0.5kb downstream 500 false Bd2: 54780588-54781087 Brachypodium distachyon
Bradi2g56710 1.0kb upstream 1.0kb upstream 4900 true Bd2: 54775688-54780587 Brachypodium distachyon
Bradi2g56710 1.0kb upstream 1.0kb upstream 1000 false Bd2: 54775688-54776687 Brachypodium distachyon
Bradi2g56710 1.0kb downstream 1.0kb downstream 4900 true Bd2: 54776688-54781587 Brachypodium distachyon
Bradi2g56710 1.0kb downstream 1.0kb downstream 1000 false Bd2: 54780588-54781587 Brachypodium distachyon
Bradi2g56710 2.0kb upstream 2.0kb upstream 5900 true Bd2: 54774688-54780587 Brachypodium distachyon
Bradi2g56710 2.0kb upstream 2.0kb upstream 2000 false Bd2: 54774688-54776687 Brachypodium distachyon
Bradi2g56710 2.0kb downstream 2.0kb downstream 5900 true Bd2: 54776688-54782587 Brachypodium distachyon
Bradi2g56710 2.0kb downstream 2.0kb downstream 2000 false Bd2: 54780588-54782587 Brachypodium distachyon
Bradi2g56710 5.0kb upstream 5.0kb upstream 8900 true Bd2: 54771688-54780587 Brachypodium distachyon
Bradi2g56710 5.0kb upstream 5.0kb upstream 5000 false Bd2: 54771688-54776687 Brachypodium distachyon
Bradi2g56710 5.0kb downstream 5.0kb downstream 8900 true Bd2: 54776688-54785587 Brachypodium distachyon
Bradi2g56710 5.0kb downstream 5.0kb downstream 5000 false Bd2: 54780588-54785587 Brachypodium distachyon
Bradi2g56710 10.0kb upstream 10.0kb upstream 13900 true Bd2: 54766688-54780587 Brachypodium distachyon
Bradi2g56710 10.0kb upstream 10.0kb upstream 10000 false Bd2: 54766688-54776687 Brachypodium distachyon
Bradi2g56710 10.0kb downstream 10.0kb downstream 13900 true Bd2: 54776688-54790587 Brachypodium distachyon
Bradi2g56710 10.0kb downstream 10.0kb downstream 10000 false Bd2: 54780588-54790587 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124569000 5269 Grass View MSA
122047427 5273 Angiosperm View MSA
121310739 5274 Embryophyte View MSA
123348151 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.663        
cufflinks 6.85        
cufflinks 8.345        
cufflinks 5.862        
cufflinks 15.087     High High
cufflinks 6.917        
cufflinks 6.707        
cufflinks 6.339        
cufflinks 7.316        
cufflinks 7.166        
cufflinks 11.053     High  
cufflinks 7.284        
cufflinks 6.915        
cufflinks 7.864     High  
cufflinks 4.782       Low
cufflinks 5.493       Low
cufflinks 6.035        
cufflinks 8.926        
cufflinks 10.263        
cufflinks 13.602     High High
cufflinks 7.886        
cufflinks 7.639        
cufflinks 7.225        
cufflinks 6.387        
cufflinks 6.15        
cufflinks 7.169        
cufflinks 8.998     High  
cufflinks 8.219        
cufflinks 7.157        
cufflinks 6.973        

0 Strain