Gene : Bradi2g56700 B. distachyon v3.1
Defline:  (1 of 2) PTHR11214//PTHR11214:SF100 - BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE // SUBFAMILY NOT NAMED Genomic Order:  6820
Name:  ? Bradi2g56700 Secondary Identifier:  ? PAC:32771440
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g56700 0.5kb upstream 0.5kb upstream 2836 true Bd2: 54769562-54772397 Brachypodium distachyon
Bradi2g56700 0.5kb upstream 0.5kb upstream 500 false Bd2: 54769562-54770061 Brachypodium distachyon
Bradi2g56700 0.5kb downstream 0.5kb downstream 2836 true Bd2: 54770062-54772897 Brachypodium distachyon
Bradi2g56700 0.5kb downstream 0.5kb downstream 500 false Bd2: 54772398-54772897 Brachypodium distachyon
Bradi2g56700 1.0kb upstream 1.0kb upstream 3336 true Bd2: 54769062-54772397 Brachypodium distachyon
Bradi2g56700 1.0kb upstream 1.0kb upstream 1000 false Bd2: 54769062-54770061 Brachypodium distachyon
Bradi2g56700 1.0kb downstream 1.0kb downstream 3336 true Bd2: 54770062-54773397 Brachypodium distachyon
Bradi2g56700 1.0kb downstream 1.0kb downstream 1000 false Bd2: 54772398-54773397 Brachypodium distachyon
Bradi2g56700 2.0kb upstream 2.0kb upstream 4336 true Bd2: 54768062-54772397 Brachypodium distachyon
Bradi2g56700 2.0kb upstream 2.0kb upstream 2000 false Bd2: 54768062-54770061 Brachypodium distachyon
Bradi2g56700 2.0kb downstream 2.0kb downstream 4336 true Bd2: 54770062-54774397 Brachypodium distachyon
Bradi2g56700 2.0kb downstream 2.0kb downstream 2000 false Bd2: 54772398-54774397 Brachypodium distachyon
Bradi2g56700 5.0kb upstream 5.0kb upstream 7336 true Bd2: 54765062-54772397 Brachypodium distachyon
Bradi2g56700 5.0kb upstream 5.0kb upstream 5000 false Bd2: 54765062-54770061 Brachypodium distachyon
Bradi2g56700 5.0kb downstream 5.0kb downstream 7336 true Bd2: 54770062-54777397 Brachypodium distachyon
Bradi2g56700 5.0kb downstream 5.0kb downstream 5000 false Bd2: 54772398-54777397 Brachypodium distachyon
Bradi2g56700 10.0kb upstream 10.0kb upstream 12336 true Bd2: 54760062-54772397 Brachypodium distachyon
Bradi2g56700 10.0kb upstream 10.0kb upstream 10000 false Bd2: 54760062-54770061 Brachypodium distachyon
Bradi2g56700 10.0kb downstream 10.0kb downstream 12336 true Bd2: 54770062-54782397 Brachypodium distachyon
Bradi2g56700 10.0kb downstream 10.0kb downstream 10000 false Bd2: 54772398-54782397 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577134 5269 Grass View MSA
122048102 5273 Angiosperm View MSA
121348547 5274 Embryophyte View MSA
123427932 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.013     Low  
cufflinks 0.008     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low Low
cufflinks 0.382       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low  
cufflinks 0.011     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.014     Low  
cufflinks 0.006     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.038     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.2     Low  
cufflinks 0.51       High
cufflinks 0.066     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.02     Low  
cufflinks 0.024     Low  
cufflinks 0.023     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain