Gene : Bradi2g57010 B. distachyon v3.1
Defline:  (1 of 1) PTHR21669//PTHR21669:SF13 - CAPZ-INTERACTING PROTEIN AND RELATED PROTEINS // WOUND-RESPONSIVE FAMILY PROTEIN Genomic Order:  6864
Name:  ? Bradi2g57010 Secondary Identifier:  ? PAC:32771810
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g57010 0.5kb upstream 0.5kb upstream 9171 true Bd2: 55001913-55011083 Brachypodium distachyon
Bradi2g57010 0.5kb upstream 0.5kb upstream 500 false Bd2: 55001913-55002412 Brachypodium distachyon
Bradi2g57010 0.5kb downstream 0.5kb downstream 9171 true Bd2: 55002413-55011583 Brachypodium distachyon
Bradi2g57010 0.5kb downstream 0.5kb downstream 500 false Bd2: 55011084-55011583 Brachypodium distachyon
Bradi2g57010 1.0kb upstream 1.0kb upstream 9671 true Bd2: 55001413-55011083 Brachypodium distachyon
Bradi2g57010 1.0kb upstream 1.0kb upstream 1000 false Bd2: 55001413-55002412 Brachypodium distachyon
Bradi2g57010 1.0kb downstream 1.0kb downstream 9671 true Bd2: 55002413-55012083 Brachypodium distachyon
Bradi2g57010 1.0kb downstream 1.0kb downstream 1000 false Bd2: 55011084-55012083 Brachypodium distachyon
Bradi2g57010 2.0kb upstream 2.0kb upstream 10671 true Bd2: 55000413-55011083 Brachypodium distachyon
Bradi2g57010 2.0kb upstream 2.0kb upstream 2000 false Bd2: 55000413-55002412 Brachypodium distachyon
Bradi2g57010 2.0kb downstream 2.0kb downstream 10671 true Bd2: 55002413-55013083 Brachypodium distachyon
Bradi2g57010 2.0kb downstream 2.0kb downstream 2000 false Bd2: 55011084-55013083 Brachypodium distachyon
Bradi2g57010 5.0kb upstream 5.0kb upstream 13671 true Bd2: 54997413-55011083 Brachypodium distachyon
Bradi2g57010 5.0kb upstream 5.0kb upstream 5000 false Bd2: 54997413-55002412 Brachypodium distachyon
Bradi2g57010 5.0kb downstream 5.0kb downstream 13671 true Bd2: 55002413-55016083 Brachypodium distachyon
Bradi2g57010 5.0kb downstream 5.0kb downstream 5000 false Bd2: 55011084-55016083 Brachypodium distachyon
Bradi2g57010 10.0kb upstream 10.0kb upstream 18671 true Bd2: 54992413-55011083 Brachypodium distachyon
Bradi2g57010 10.0kb upstream 10.0kb upstream 10000 false Bd2: 54992413-55002412 Brachypodium distachyon
Bradi2g57010 10.0kb downstream 10.0kb downstream 18671 true Bd2: 55002413-55021083 Brachypodium distachyon
Bradi2g57010 10.0kb downstream 10.0kb downstream 10000 false Bd2: 55011084-55021083 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577269 5269 Grass View MSA
122045408 5273 Angiosperm View MSA
121344687 5274 Embryophyte View MSA
123380086 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.925        
cufflinks 1.306        
cufflinks 1.314        
cufflinks 1.007        
cufflinks 0.515       Low
cufflinks 1.065        
cufflinks 1.144        
cufflinks 0.994        
cufflinks 1.044        
cufflinks 0.722        
cufflinks 1.179        
cufflinks 1.113        
cufflinks 0.922        
cufflinks 0.752        
cufflinks 0.734        
cufflinks 1.324        
cufflinks 1.061        
cufflinks 1.684       High
cufflinks 1.164        
cufflinks 0.345       Low
cufflinks 0.986        
cufflinks 1.25        
cufflinks 0.983        
cufflinks 0.876        
cufflinks 0.873        
cufflinks 1.102        
cufflinks 1.082        
cufflinks 1.057        
cufflinks 0.92        
cufflinks 1.193        

0 Strain