Gene : Bradi2g57270 B. distachyon v3.1
Defline:  (1 of 7) PF00472 - RF-1 domain (RF-1) Genomic Order:  6895
Name:  ? Bradi2g57270 Secondary Identifier:  ? PAC:32775180
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g57270 0.5kb upstream 0.5kb upstream 3426 true Bd2: 55241326-55244751 Brachypodium distachyon
Bradi2g57270 0.5kb upstream 0.5kb upstream 500 false Bd2: 55244252-55244751 Brachypodium distachyon
Bradi2g57270 0.5kb downstream 0.5kb downstream 3426 true Bd2: 55240826-55244251 Brachypodium distachyon
Bradi2g57270 0.5kb downstream 0.5kb downstream 500 false Bd2: 55240826-55241325 Brachypodium distachyon
Bradi2g57270 1.0kb upstream 1.0kb upstream 3926 true Bd2: 55241326-55245251 Brachypodium distachyon
Bradi2g57270 1.0kb upstream 1.0kb upstream 1000 false Bd2: 55244252-55245251 Brachypodium distachyon
Bradi2g57270 1.0kb downstream 1.0kb downstream 3926 true Bd2: 55240326-55244251 Brachypodium distachyon
Bradi2g57270 1.0kb downstream 1.0kb downstream 1000 false Bd2: 55240326-55241325 Brachypodium distachyon
Bradi2g57270 2.0kb upstream 2.0kb upstream 4926 true Bd2: 55241326-55246251 Brachypodium distachyon
Bradi2g57270 2.0kb upstream 2.0kb upstream 2000 false Bd2: 55244252-55246251 Brachypodium distachyon
Bradi2g57270 2.0kb downstream 2.0kb downstream 4926 true Bd2: 55239326-55244251 Brachypodium distachyon
Bradi2g57270 2.0kb downstream 2.0kb downstream 2000 false Bd2: 55239326-55241325 Brachypodium distachyon
Bradi2g57270 5.0kb upstream 5.0kb upstream 7926 true Bd2: 55241326-55249251 Brachypodium distachyon
Bradi2g57270 5.0kb upstream 5.0kb upstream 5000 false Bd2: 55244252-55249251 Brachypodium distachyon
Bradi2g57270 5.0kb downstream 5.0kb downstream 7926 true Bd2: 55236326-55244251 Brachypodium distachyon
Bradi2g57270 5.0kb downstream 5.0kb downstream 5000 false Bd2: 55236326-55241325 Brachypodium distachyon
Bradi2g57270 10.0kb upstream 10.0kb upstream 12926 true Bd2: 55241326-55254251 Brachypodium distachyon
Bradi2g57270 10.0kb upstream 10.0kb upstream 10000 false Bd2: 55244252-55254251 Brachypodium distachyon
Bradi2g57270 10.0kb downstream 10.0kb downstream 12926 true Bd2: 55231326-55244251 Brachypodium distachyon
Bradi2g57270 10.0kb downstream 10.0kb downstream 10000 false Bd2: 55231326-55241325 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124579637 5269 Grass View MSA
122041593 5273 Angiosperm View MSA
121346741 5274 Embryophyte View MSA
123380435 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.118        
cufflinks 10.86     High High
cufflinks 10.38     High  
cufflinks 11.575     High High
cufflinks 6.231        
cufflinks 9.034        
cufflinks 10.873     High High
cufflinks 8.581        
cufflinks 8.347        
cufflinks 9.46        
cufflinks 8.812     High  
cufflinks 6.423        
cufflinks 5.96        
cufflinks 7.16        
cufflinks 5.697        
cufflinks 9.708     High  
cufflinks 8.136        
cufflinks 4.514       Low
cufflinks 4.278       Low
cufflinks 5.232       Low
cufflinks 6.652        
cufflinks 9.006        
cufflinks 7.97        
cufflinks 7.677        
cufflinks 10.085     High  
cufflinks 10.604       High
cufflinks 5.916        
cufflinks 10.038        
cufflinks 10.029        
cufflinks 8.485        

0 Strain