Gene : Bradi2g55310 B. distachyon v3.1
Defline:  (1 of 1) PF07014 - Hs1pro-1 protein C-terminus (Hs1pro-1_C) Genomic Order:  6662
Name:  ? Bradi2g55310 Secondary Identifier:  ? PAC:32777014
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g55310 0.5kb upstream 0.5kb upstream 2695 true Bd2: 53753261-53755955 Brachypodium distachyon
Bradi2g55310 0.5kb upstream 0.5kb upstream 500 false Bd2: 53755456-53755955 Brachypodium distachyon
Bradi2g55310 0.5kb downstream 0.5kb downstream 2695 true Bd2: 53752761-53755455 Brachypodium distachyon
Bradi2g55310 0.5kb downstream 0.5kb downstream 500 false Bd2: 53752761-53753260 Brachypodium distachyon
Bradi2g55310 1.0kb upstream 1.0kb upstream 3195 true Bd2: 53753261-53756455 Brachypodium distachyon
Bradi2g55310 1.0kb upstream 1.0kb upstream 1000 false Bd2: 53755456-53756455 Brachypodium distachyon
Bradi2g55310 1.0kb downstream 1.0kb downstream 3195 true Bd2: 53752261-53755455 Brachypodium distachyon
Bradi2g55310 1.0kb downstream 1.0kb downstream 1000 false Bd2: 53752261-53753260 Brachypodium distachyon
Bradi2g55310 2.0kb upstream 2.0kb upstream 4195 true Bd2: 53753261-53757455 Brachypodium distachyon
Bradi2g55310 2.0kb upstream 2.0kb upstream 2000 false Bd2: 53755456-53757455 Brachypodium distachyon
Bradi2g55310 2.0kb downstream 2.0kb downstream 4195 true Bd2: 53751261-53755455 Brachypodium distachyon
Bradi2g55310 2.0kb downstream 2.0kb downstream 2000 false Bd2: 53751261-53753260 Brachypodium distachyon
Bradi2g55310 5.0kb upstream 5.0kb upstream 7195 true Bd2: 53753261-53760455 Brachypodium distachyon
Bradi2g55310 5.0kb upstream 5.0kb upstream 5000 false Bd2: 53755456-53760455 Brachypodium distachyon
Bradi2g55310 5.0kb downstream 5.0kb downstream 7195 true Bd2: 53748261-53755455 Brachypodium distachyon
Bradi2g55310 5.0kb downstream 5.0kb downstream 5000 false Bd2: 53748261-53753260 Brachypodium distachyon
Bradi2g55310 10.0kb upstream 10.0kb upstream 12195 true Bd2: 53753261-53765455 Brachypodium distachyon
Bradi2g55310 10.0kb upstream 10.0kb upstream 10000 false Bd2: 53755456-53765455 Brachypodium distachyon
Bradi2g55310 10.0kb downstream 10.0kb downstream 12195 true Bd2: 53743261-53755455 Brachypodium distachyon
Bradi2g55310 10.0kb downstream 10.0kb downstream 10000 false Bd2: 53743261-53753260 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124579616 5269 Grass View MSA
122043569 5273 Angiosperm View MSA
121344481 5274 Embryophyte View MSA
123380055 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.498        
cufflinks 0.263       Low
cufflinks 1.321        
cufflinks 0.423        
cufflinks 9.113     High High
cufflinks 0.344       Low
cufflinks 0.538        
cufflinks 5.222        
cufflinks 0.138       Low
cufflinks 1.471        
cufflinks 17.54     High High
cufflinks 9.682     High High
cufflinks 6.077        
cufflinks 6.011        
cufflinks 2.181        
cufflinks 3.11        
cufflinks 0.206       Low
cufflinks 8.041        
cufflinks 10.684       High
cufflinks 77.916     High High
cufflinks 0.66        
cufflinks 0.708        
cufflinks 0.388       Low
cufflinks 0.093     Low Low
cufflinks 0.418        
cufflinks 1.545        
cufflinks 2.023        
cufflinks 1.739        
cufflinks 1.054        
cufflinks 1.065        

0 Strain