Gene : Bradi4g21680 B. distachyon v3.1
Defline:  (1 of 2) KOG4508 - Uncharacterized conserved protein Genomic Order:  2736
Name:  ? Bradi4g21680 Secondary Identifier:  ? PAC:32785043
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g21680 0.5kb upstream 0.5kb upstream 19990 true Bd4: 25050621-25070610 Brachypodium distachyon
Bradi4g21680 0.5kb upstream 0.5kb upstream 500 false Bd4: 25070111-25070610 Brachypodium distachyon
Bradi4g21680 0.5kb downstream 0.5kb downstream 19990 true Bd4: 25050121-25070110 Brachypodium distachyon
Bradi4g21680 0.5kb downstream 0.5kb downstream 500 false Bd4: 25050121-25050620 Brachypodium distachyon
Bradi4g21680 1.0kb upstream 1.0kb upstream 20490 true Bd4: 25050621-25071110 Brachypodium distachyon
Bradi4g21680 1.0kb upstream 1.0kb upstream 1000 false Bd4: 25070111-25071110 Brachypodium distachyon
Bradi4g21680 1.0kb downstream 1.0kb downstream 20490 true Bd4: 25049621-25070110 Brachypodium distachyon
Bradi4g21680 1.0kb downstream 1.0kb downstream 1000 false Bd4: 25049621-25050620 Brachypodium distachyon
Bradi4g21680 2.0kb upstream 2.0kb upstream 21490 true Bd4: 25050621-25072110 Brachypodium distachyon
Bradi4g21680 2.0kb upstream 2.0kb upstream 2000 false Bd4: 25070111-25072110 Brachypodium distachyon
Bradi4g21680 2.0kb downstream 2.0kb downstream 21490 true Bd4: 25048621-25070110 Brachypodium distachyon
Bradi4g21680 2.0kb downstream 2.0kb downstream 2000 false Bd4: 25048621-25050620 Brachypodium distachyon
Bradi4g21680 5.0kb upstream 5.0kb upstream 24490 true Bd4: 25050621-25075110 Brachypodium distachyon
Bradi4g21680 5.0kb upstream 5.0kb upstream 5000 false Bd4: 25070111-25075110 Brachypodium distachyon
Bradi4g21680 5.0kb downstream 5.0kb downstream 24490 true Bd4: 25045621-25070110 Brachypodium distachyon
Bradi4g21680 5.0kb downstream 5.0kb downstream 5000 false Bd4: 25045621-25050620 Brachypodium distachyon
Bradi4g21680 10.0kb upstream 10.0kb upstream 29490 true Bd4: 25050621-25080110 Brachypodium distachyon
Bradi4g21680 10.0kb upstream 10.0kb upstream 10000 false Bd4: 25070111-25080110 Brachypodium distachyon
Bradi4g21680 10.0kb downstream 10.0kb downstream 29490 true Bd4: 25040621-25070110 Brachypodium distachyon
Bradi4g21680 10.0kb downstream 10.0kb downstream 10000 false Bd4: 25040621-25050620 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124570000 5269 Grass View MSA
122047159 5273 Angiosperm View MSA
121348549 5274 Embryophyte View MSA
123425506 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.085        
cufflinks 0.107        
cufflinks 0.108        
cufflinks 0.088     Low  
cufflinks 0.045     Low Low
cufflinks 0.088     Low  
cufflinks 0.105        
cufflinks 0.076     Low  
cufflinks 0.075     Low  
cufflinks 0.067     Low  
cufflinks 0.098        
cufflinks 0.069     Low  
cufflinks 0.055     Low  
cufflinks 0.058     Low  
cufflinks 0.042     Low Low
cufflinks 0.094        
cufflinks 0.102     Low  
cufflinks 0.19       High
cufflinks 0.103     Low  
cufflinks 0.016     Low Low
cufflinks 0.081     Low  
cufflinks 0.077     Low  
cufflinks 0.069     Low  
cufflinks 0.075     Low  
cufflinks 0.088     Low  
cufflinks 0.122        
cufflinks 0.077     Low  
cufflinks 0.094     Low  
cufflinks 0.09     Low  
cufflinks 0.081     Low  

0 Strain