Gene : Bradi4g27057 B. distachyon v3.1
Defline:  (1 of 1) PTHR10871:SF4 - DNA TOPOISOMERASE 6 SUBUNIT B Genomic Order:  3448
Name:  ? Bradi4g27057 Secondary Identifier:  ? PAC:32783765
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g27057 0.5kb upstream 0.5kb upstream 13352 true Bd4: 31959060-31972411 Brachypodium distachyon
Bradi4g27057 0.5kb upstream 0.5kb upstream 500 false Bd4: 31959060-31959559 Brachypodium distachyon
Bradi4g27057 0.5kb downstream 0.5kb downstream 13352 true Bd4: 31959560-31972911 Brachypodium distachyon
Bradi4g27057 0.5kb downstream 0.5kb downstream 500 false Bd4: 31972412-31972911 Brachypodium distachyon
Bradi4g27057 1.0kb upstream 1.0kb upstream 13852 true Bd4: 31958560-31972411 Brachypodium distachyon
Bradi4g27057 1.0kb upstream 1.0kb upstream 1000 false Bd4: 31958560-31959559 Brachypodium distachyon
Bradi4g27057 1.0kb downstream 1.0kb downstream 13852 true Bd4: 31959560-31973411 Brachypodium distachyon
Bradi4g27057 1.0kb downstream 1.0kb downstream 1000 false Bd4: 31972412-31973411 Brachypodium distachyon
Bradi4g27057 2.0kb upstream 2.0kb upstream 14852 true Bd4: 31957560-31972411 Brachypodium distachyon
Bradi4g27057 2.0kb upstream 2.0kb upstream 2000 false Bd4: 31957560-31959559 Brachypodium distachyon
Bradi4g27057 2.0kb downstream 2.0kb downstream 14852 true Bd4: 31959560-31974411 Brachypodium distachyon
Bradi4g27057 2.0kb downstream 2.0kb downstream 2000 false Bd4: 31972412-31974411 Brachypodium distachyon
Bradi4g27057 5.0kb upstream 5.0kb upstream 17852 true Bd4: 31954560-31972411 Brachypodium distachyon
Bradi4g27057 5.0kb upstream 5.0kb upstream 5000 false Bd4: 31954560-31959559 Brachypodium distachyon
Bradi4g27057 5.0kb downstream 5.0kb downstream 17852 true Bd4: 31959560-31977411 Brachypodium distachyon
Bradi4g27057 5.0kb downstream 5.0kb downstream 5000 false Bd4: 31972412-31977411 Brachypodium distachyon
Bradi4g27057 10.0kb upstream 10.0kb upstream 22852 true Bd4: 31949560-31972411 Brachypodium distachyon
Bradi4g27057 10.0kb upstream 10.0kb upstream 10000 false Bd4: 31949560-31959559 Brachypodium distachyon
Bradi4g27057 10.0kb downstream 10.0kb downstream 22852 true Bd4: 31959560-31982411 Brachypodium distachyon
Bradi4g27057 10.0kb downstream 10.0kb downstream 10000 false Bd4: 31972412-31982411 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124575503 5269 Grass View MSA
122045441 5273 Angiosperm View MSA
121347083 5274 Embryophyte View MSA
123424987 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.529        
cufflinks 0.96       High
cufflinks 0.856        
cufflinks 0.939       High
cufflinks 0.337       Low
cufflinks 0.795        
cufflinks 0.814        
cufflinks 0.629        
cufflinks 0.772        
cufflinks 0.647        
cufflinks 0.539        
cufflinks 0.622        
cufflinks 0.492        
cufflinks 0.516        
cufflinks 0.357       Low
cufflinks 0.798        
cufflinks 0.561        
cufflinks 1.025       High
cufflinks 0.628        
cufflinks 0.204       Low
cufflinks 0.716        
cufflinks 0.843        
cufflinks 0.607        
cufflinks 0.701        
cufflinks 0.825        
cufflinks 0.849        
cufflinks 0.645        
cufflinks 0.735        
cufflinks 0.742        
cufflinks 0.791        

0 Strain