Gene : Bradi2g62280 B. distachyon v3.1
Defline:  (1 of 1) PTHR30544:SF6 - RADICAL SAM DOMAIN-CONTAINING PROTEIN Genomic Order:  7570
Name:  ? Bradi2g62280 Secondary Identifier:  ? PAC:32772590
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g62280 0.5kb upstream 0.5kb upstream 3165 true Bd2: 58783376-58786540 Brachypodium distachyon
Bradi2g62280 0.5kb upstream 0.5kb upstream 500 false Bd2: 58786041-58786540 Brachypodium distachyon
Bradi2g62280 0.5kb downstream 0.5kb downstream 3165 true Bd2: 58782876-58786040 Brachypodium distachyon
Bradi2g62280 0.5kb downstream 0.5kb downstream 500 false Bd2: 58782876-58783375 Brachypodium distachyon
Bradi2g62280 1.0kb upstream 1.0kb upstream 3665 true Bd2: 58783376-58787040 Brachypodium distachyon
Bradi2g62280 1.0kb upstream 1.0kb upstream 1000 false Bd2: 58786041-58787040 Brachypodium distachyon
Bradi2g62280 1.0kb downstream 1.0kb downstream 3665 true Bd2: 58782376-58786040 Brachypodium distachyon
Bradi2g62280 1.0kb downstream 1.0kb downstream 1000 false Bd2: 58782376-58783375 Brachypodium distachyon
Bradi2g62280 2.0kb upstream 2.0kb upstream 4665 true Bd2: 58783376-58788040 Brachypodium distachyon
Bradi2g62280 2.0kb upstream 2.0kb upstream 2000 false Bd2: 58786041-58788040 Brachypodium distachyon
Bradi2g62280 2.0kb downstream 2.0kb downstream 4665 true Bd2: 58781376-58786040 Brachypodium distachyon
Bradi2g62280 2.0kb downstream 2.0kb downstream 2000 false Bd2: 58781376-58783375 Brachypodium distachyon
Bradi2g62280 5.0kb upstream 5.0kb upstream 7665 true Bd2: 58783376-58791040 Brachypodium distachyon
Bradi2g62280 5.0kb upstream 5.0kb upstream 5000 false Bd2: 58786041-58791040 Brachypodium distachyon
Bradi2g62280 5.0kb downstream 5.0kb downstream 7665 true Bd2: 58778376-58786040 Brachypodium distachyon
Bradi2g62280 5.0kb downstream 5.0kb downstream 5000 false Bd2: 58778376-58783375 Brachypodium distachyon
Bradi2g62280 10.0kb upstream 10.0kb upstream 12665 true Bd2: 58783376-58796040 Brachypodium distachyon
Bradi2g62280 10.0kb upstream 10.0kb upstream 10000 false Bd2: 58786041-58796040 Brachypodium distachyon
Bradi2g62280 10.0kb downstream 10.0kb downstream 12665 true Bd2: 58773376-58786040 Brachypodium distachyon
Bradi2g62280 10.0kb downstream 10.0kb downstream 10000 false Bd2: 58773376-58783375 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124576335 5269 Grass View MSA
122048523 5273 Angiosperm View MSA
123429187 5275 Viridiplantae View MSA
121344688 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.472     High  
cufflinks 46.829     High High
cufflinks 41.229     High High
cufflinks 45.403     High High
cufflinks 10.757     High Low
cufflinks 37.092     High  
cufflinks 41.878     High High
cufflinks 26.73     High  
cufflinks 30.282     High  
cufflinks 31.105     High  
cufflinks 19.53     High  
cufflinks 31.491     High  
cufflinks 12.765     High  
cufflinks 18.377     High  
cufflinks 19.404     High  
cufflinks 42.632     High High
cufflinks 25.015     High  
cufflinks 11.721     High Low
cufflinks 14.074     High  
cufflinks 4.65       Low
cufflinks 19.63     High  
cufflinks 31.603     High  
cufflinks 22.237     High  
cufflinks 26.021     High  
cufflinks 39.242     High  
cufflinks 34.45     High  
cufflinks 10.56     High Low
cufflinks 32.419     High  
cufflinks 33.758     High  
cufflinks 36.302     High  

0 Strain