Gene : Bradi3g00260 B. distachyon v3.1
Defline:  (1 of 1) PTHR34284:SF1 - FG-GAP REPEAT-CONTAINING PROTEIN Genomic Order:  11
Name:  ? Bradi3g00260 Secondary Identifier:  ? PAC:32813007
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g00260 0.5kb upstream 0.5kb upstream 8503 true Bd3: 58122-66624 Brachypodium distachyon
Bradi3g00260 0.5kb upstream 0.5kb upstream 500 false Bd3: 58122-58621 Brachypodium distachyon
Bradi3g00260 0.5kb downstream 0.5kb downstream 8503 true Bd3: 58622-67124 Brachypodium distachyon
Bradi3g00260 0.5kb downstream 0.5kb downstream 500 false Bd3: 66625-67124 Brachypodium distachyon
Bradi3g00260 1.0kb upstream 1.0kb upstream 9003 true Bd3: 57622-66624 Brachypodium distachyon
Bradi3g00260 1.0kb upstream 1.0kb upstream 1000 false Bd3: 57622-58621 Brachypodium distachyon
Bradi3g00260 1.0kb downstream 1.0kb downstream 9003 true Bd3: 58622-67624 Brachypodium distachyon
Bradi3g00260 1.0kb downstream 1.0kb downstream 1000 false Bd3: 66625-67624 Brachypodium distachyon
Bradi3g00260 2.0kb upstream 2.0kb upstream 10003 true Bd3: 56622-66624 Brachypodium distachyon
Bradi3g00260 2.0kb upstream 2.0kb upstream 2000 false Bd3: 56622-58621 Brachypodium distachyon
Bradi3g00260 2.0kb downstream 2.0kb downstream 10003 true Bd3: 58622-68624 Brachypodium distachyon
Bradi3g00260 2.0kb downstream 2.0kb downstream 2000 false Bd3: 66625-68624 Brachypodium distachyon
Bradi3g00260 5.0kb upstream 5.0kb upstream 13003 true Bd3: 53622-66624 Brachypodium distachyon
Bradi3g00260 5.0kb upstream 5.0kb upstream 5000 false Bd3: 53622-58621 Brachypodium distachyon
Bradi3g00260 5.0kb downstream 5.0kb downstream 13003 true Bd3: 58622-71624 Brachypodium distachyon
Bradi3g00260 5.0kb downstream 5.0kb downstream 5000 false Bd3: 66625-71624 Brachypodium distachyon
Bradi3g00260 10.0kb upstream 10.0kb upstream 18003 true Bd3: 48622-66624 Brachypodium distachyon
Bradi3g00260 10.0kb upstream 10.0kb upstream 10000 false Bd3: 48622-58621 Brachypodium distachyon
Bradi3g00260 10.0kb downstream 10.0kb downstream 18003 true Bd3: 58622-76624 Brachypodium distachyon
Bradi3g00260 10.0kb downstream 10.0kb downstream 10000 false Bd3: 66625-76624 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124576385 5269 Grass View MSA
122042387 5273 Angiosperm View MSA
121346103 5274 Embryophyte View MSA
123425546 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.159       Low
cufflinks 7.627        
cufflinks 8.354        
cufflinks 5.964        
cufflinks 3.905       Low
cufflinks 7.356        
cufflinks 7.338        
cufflinks 6.475        
cufflinks 7.263        
cufflinks 5.775        
cufflinks 6.118        
cufflinks 6.937        
cufflinks 5.189        
cufflinks 4.991        
cufflinks 3.794       Low
cufflinks 7.818        
cufflinks 7.943        
cufflinks 14.734     High High
cufflinks 11.45       High
cufflinks 6.263        
cufflinks 8.789        
cufflinks 8.162        
cufflinks 6.277        
cufflinks 6.716        
cufflinks 6.001        
cufflinks 7.74        
cufflinks 6.334        
cufflinks 7.604        
cufflinks 7.378        
cufflinks 8.375        

0 Strain