Gene : Bradi3g00290 B. distachyon v3.1
Defline:  (1 of 1) PTHR10938//PTHR10938:SF2 - TRANSLATION INITIATION FACTOR IF-3 Genomic Order:  15
Name:  ? Bradi3g00290 Secondary Identifier:  ? PAC:32817248
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g00290 0.5kb upstream 0.5kb upstream 6207 true Bd3: 97131-103337 Brachypodium distachyon
Bradi3g00290 0.5kb upstream 0.5kb upstream 500 false Bd3: 97131-97630 Brachypodium distachyon
Bradi3g00290 0.5kb downstream 0.5kb downstream 6207 true Bd3: 97631-103837 Brachypodium distachyon
Bradi3g00290 0.5kb downstream 0.5kb downstream 500 false Bd3: 103338-103837 Brachypodium distachyon
Bradi3g00290 1.0kb upstream 1.0kb upstream 6707 true Bd3: 96631-103337 Brachypodium distachyon
Bradi3g00290 1.0kb upstream 1.0kb upstream 1000 false Bd3: 96631-97630 Brachypodium distachyon
Bradi3g00290 1.0kb downstream 1.0kb downstream 6707 true Bd3: 97631-104337 Brachypodium distachyon
Bradi3g00290 1.0kb downstream 1.0kb downstream 1000 false Bd3: 103338-104337 Brachypodium distachyon
Bradi3g00290 2.0kb upstream 2.0kb upstream 7707 true Bd3: 95631-103337 Brachypodium distachyon
Bradi3g00290 2.0kb upstream 2.0kb upstream 2000 false Bd3: 95631-97630 Brachypodium distachyon
Bradi3g00290 2.0kb downstream 2.0kb downstream 7707 true Bd3: 97631-105337 Brachypodium distachyon
Bradi3g00290 2.0kb downstream 2.0kb downstream 2000 false Bd3: 103338-105337 Brachypodium distachyon
Bradi3g00290 5.0kb upstream 5.0kb upstream 10707 true Bd3: 92631-103337 Brachypodium distachyon
Bradi3g00290 5.0kb upstream 5.0kb upstream 5000 false Bd3: 92631-97630 Brachypodium distachyon
Bradi3g00290 5.0kb downstream 5.0kb downstream 10707 true Bd3: 97631-108337 Brachypodium distachyon
Bradi3g00290 5.0kb downstream 5.0kb downstream 5000 false Bd3: 103338-108337 Brachypodium distachyon
Bradi3g00290 10.0kb upstream 10.0kb upstream 15707 true Bd3: 87631-103337 Brachypodium distachyon
Bradi3g00290 10.0kb upstream 10.0kb upstream 10000 false Bd3: 87631-97630 Brachypodium distachyon
Bradi3g00290 10.0kb downstream 10.0kb downstream 15707 true Bd3: 97631-113337 Brachypodium distachyon
Bradi3g00290 10.0kb downstream 10.0kb downstream 10000 false Bd3: 103338-113337 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124580738 5269 Grass View MSA
122049946 5273 Angiosperm View MSA
121349179 5274 Embryophyte View MSA
123425847 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.139        
cufflinks 1.77        
cufflinks 1.822        
cufflinks 1.515        
cufflinks 1.016        
cufflinks 1.425        
cufflinks 1.496        
cufflinks 1.382        
cufflinks 1.366        
cufflinks 1.261        
cufflinks 0.901       Low
cufflinks 1.484        
cufflinks 0.688       Low
cufflinks 0.776       Low
cufflinks 0.949       Low
cufflinks 1.627        
cufflinks 1.254        
cufflinks 2.663       High
cufflinks 1.808        
cufflinks 1.043        
cufflinks 1.977        
cufflinks 1.587        
cufflinks 1.506        
cufflinks 1.448        
cufflinks 1.624        
cufflinks 1.485        
cufflinks 0.993        
cufflinks 1.525        
cufflinks 1.497        
cufflinks 2.093       High

0 Strain