Gene : Bradi2g59370 B. distachyon v3.1
Defline:  (1 of 2) 2.2.1.2 - Transaldolase / Glycerone transferase Genomic Order:  7185
Name:  ? Bradi2g59370 Secondary Identifier:  ? PAC:32781602
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon NONOXIPENT-PWY Brachypodium distachyon pathologic  
Bdistachyon PENTOSE-P-PWY Brachypodium distachyon pathologic  
Bdistachyon PWY-5723 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g59370 0.5kb upstream 0.5kb upstream 3698 true Bd2: 56888095-56891792 Brachypodium distachyon
Bradi2g59370 0.5kb upstream 0.5kb upstream 500 false Bd2: 56891293-56891792 Brachypodium distachyon
Bradi2g59370 0.5kb downstream 0.5kb downstream 3698 true Bd2: 56887595-56891292 Brachypodium distachyon
Bradi2g59370 0.5kb downstream 0.5kb downstream 500 false Bd2: 56887595-56888094 Brachypodium distachyon
Bradi2g59370 1.0kb upstream 1.0kb upstream 4198 true Bd2: 56888095-56892292 Brachypodium distachyon
Bradi2g59370 1.0kb upstream 1.0kb upstream 1000 false Bd2: 56891293-56892292 Brachypodium distachyon
Bradi2g59370 1.0kb downstream 1.0kb downstream 4198 true Bd2: 56887095-56891292 Brachypodium distachyon
Bradi2g59370 1.0kb downstream 1.0kb downstream 1000 false Bd2: 56887095-56888094 Brachypodium distachyon
Bradi2g59370 2.0kb upstream 2.0kb upstream 5198 true Bd2: 56888095-56893292 Brachypodium distachyon
Bradi2g59370 2.0kb upstream 2.0kb upstream 2000 false Bd2: 56891293-56893292 Brachypodium distachyon
Bradi2g59370 2.0kb downstream 2.0kb downstream 5198 true Bd2: 56886095-56891292 Brachypodium distachyon
Bradi2g59370 2.0kb downstream 2.0kb downstream 2000 false Bd2: 56886095-56888094 Brachypodium distachyon
Bradi2g59370 5.0kb upstream 5.0kb upstream 8198 true Bd2: 56888095-56896292 Brachypodium distachyon
Bradi2g59370 5.0kb upstream 5.0kb upstream 5000 false Bd2: 56891293-56896292 Brachypodium distachyon
Bradi2g59370 5.0kb downstream 5.0kb downstream 8198 true Bd2: 56883095-56891292 Brachypodium distachyon
Bradi2g59370 5.0kb downstream 5.0kb downstream 5000 false Bd2: 56883095-56888094 Brachypodium distachyon
Bradi2g59370 10.0kb upstream 10.0kb upstream 13198 true Bd2: 56888095-56901292 Brachypodium distachyon
Bradi2g59370 10.0kb upstream 10.0kb upstream 10000 false Bd2: 56891293-56901292 Brachypodium distachyon
Bradi2g59370 10.0kb downstream 10.0kb downstream 13198 true Bd2: 56878095-56891292 Brachypodium distachyon
Bradi2g59370 10.0kb downstream 10.0kb downstream 10000 false Bd2: 56878095-56888094 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124574668 5269 Grass View MSA
122044911 5273 Angiosperm View MSA
121343866 5274 Embryophyte View MSA
123379934 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.373     High  
cufflinks 15.561     High  
cufflinks 15.893     High  
cufflinks 14.865     High  
cufflinks 18.25     High  
cufflinks 14.702     High  
cufflinks 15.548     High  
cufflinks 16.459     High  
cufflinks 15.567     High  
cufflinks 10.501     High  
cufflinks 9.6     High Low
cufflinks 15.805     High  
cufflinks 8.257     High Low
cufflinks 7.57       Low
cufflinks 18.222     High  
cufflinks 19.371     High  
cufflinks 20.075     High  
cufflinks 110.921     High High
cufflinks 38.954     High High
cufflinks 34.961     High High
cufflinks 36.023     High High
cufflinks 13.027     High  
cufflinks 15.732     High  
cufflinks 15.246     High  
cufflinks 14.14     High  
cufflinks 13.705     High  
cufflinks 9.683     High Low
cufflinks 12.493     High  
cufflinks 12.324     High  
cufflinks 26.998     High  

0 Strain