Gene : Bradi2g60080 B. distachyon v3.1
Defline:  (1 of 4) PTHR22884//PTHR22884:SF328 - SET DOMAIN PROTEINS // SUBFAMILY NOT NAMED Genomic Order:  7264
Name:  ? Bradi2g60080 Secondary Identifier:  ? PAC:32774522
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g60080 0.5kb upstream 0.5kb upstream 2453 true Bd2: 57303619-57306071 Brachypodium distachyon
Bradi2g60080 0.5kb upstream 0.5kb upstream 500 false Bd2: 57303619-57304118 Brachypodium distachyon
Bradi2g60080 0.5kb downstream 0.5kb downstream 2453 true Bd2: 57304119-57306571 Brachypodium distachyon
Bradi2g60080 0.5kb downstream 0.5kb downstream 500 false Bd2: 57306072-57306571 Brachypodium distachyon
Bradi2g60080 1.0kb upstream 1.0kb upstream 2953 true Bd2: 57303119-57306071 Brachypodium distachyon
Bradi2g60080 1.0kb upstream 1.0kb upstream 1000 false Bd2: 57303119-57304118 Brachypodium distachyon
Bradi2g60080 1.0kb downstream 1.0kb downstream 2953 true Bd2: 57304119-57307071 Brachypodium distachyon
Bradi2g60080 1.0kb downstream 1.0kb downstream 1000 false Bd2: 57306072-57307071 Brachypodium distachyon
Bradi2g60080 2.0kb upstream 2.0kb upstream 3953 true Bd2: 57302119-57306071 Brachypodium distachyon
Bradi2g60080 2.0kb upstream 2.0kb upstream 2000 false Bd2: 57302119-57304118 Brachypodium distachyon
Bradi2g60080 2.0kb downstream 2.0kb downstream 3953 true Bd2: 57304119-57308071 Brachypodium distachyon
Bradi2g60080 2.0kb downstream 2.0kb downstream 2000 false Bd2: 57306072-57308071 Brachypodium distachyon
Bradi2g60080 5.0kb upstream 5.0kb upstream 6953 true Bd2: 57299119-57306071 Brachypodium distachyon
Bradi2g60080 5.0kb upstream 5.0kb upstream 5000 false Bd2: 57299119-57304118 Brachypodium distachyon
Bradi2g60080 5.0kb downstream 5.0kb downstream 6953 true Bd2: 57304119-57311071 Brachypodium distachyon
Bradi2g60080 5.0kb downstream 5.0kb downstream 5000 false Bd2: 57306072-57311071 Brachypodium distachyon
Bradi2g60080 10.0kb upstream 10.0kb upstream 11953 true Bd2: 57294119-57306071 Brachypodium distachyon
Bradi2g60080 10.0kb upstream 10.0kb upstream 10000 false Bd2: 57294119-57304118 Brachypodium distachyon
Bradi2g60080 10.0kb downstream 10.0kb downstream 11953 true Bd2: 57304119-57316071 Brachypodium distachyon
Bradi2g60080 10.0kb downstream 10.0kb downstream 10000 false Bd2: 57306072-57316071 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124578691 5269 Grass View MSA
122047212 5273 Angiosperm View MSA
123428946 5275 Viridiplantae View MSA
121310709 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.152       Low
cufflinks 0.461        
cufflinks 0.523        
cufflinks 0.359        
cufflinks 0.435        
cufflinks 0.311        
cufflinks 0.554        
cufflinks 0.366        
cufflinks 0.387        
cufflinks 0.624        
cufflinks 0.511        
cufflinks 0.232        
cufflinks 0.338        
cufflinks 0.456        
cufflinks 0.049     Low Low
cufflinks 0.432        
cufflinks 0.078     Low Low
cufflinks 1.204       High
cufflinks 0.274        
cufflinks 0.496        
cufflinks 0.538        
cufflinks 0.347        
cufflinks 0.297        
cufflinks 0.296        
cufflinks 0.415        
cufflinks 0.466        
cufflinks 0.177       Low
cufflinks 0.649        
cufflinks 0.485        
cufflinks 0.501        

0 Strain