Gene : Bradi2g60880 B. distachyon v3.1
Defline:  (1 of 2) PTHR13247//PTHR13247:SF3 - TETRATRICOPEPTIDE REPEAT PROTEIN 11 TPR REPEAT PROTEIN 11 Genomic Order:  7380
Name:  ? Bradi2g60880 Secondary Identifier:  ? PAC:32773267
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g60880 0.5kb upstream 0.5kb upstream 2006 true Bd2: 57928266-57930271 Brachypodium distachyon
Bradi2g60880 0.5kb upstream 0.5kb upstream 500 false Bd2: 57928266-57928765 Brachypodium distachyon
Bradi2g60880 0.5kb downstream 0.5kb downstream 2006 true Bd2: 57928766-57930771 Brachypodium distachyon
Bradi2g60880 0.5kb downstream 0.5kb downstream 500 false Bd2: 57930272-57930771 Brachypodium distachyon
Bradi2g60880 1.0kb upstream 1.0kb upstream 2506 true Bd2: 57927766-57930271 Brachypodium distachyon
Bradi2g60880 1.0kb upstream 1.0kb upstream 1000 false Bd2: 57927766-57928765 Brachypodium distachyon
Bradi2g60880 1.0kb downstream 1.0kb downstream 2506 true Bd2: 57928766-57931271 Brachypodium distachyon
Bradi2g60880 1.0kb downstream 1.0kb downstream 1000 false Bd2: 57930272-57931271 Brachypodium distachyon
Bradi2g60880 2.0kb upstream 2.0kb upstream 3506 true Bd2: 57926766-57930271 Brachypodium distachyon
Bradi2g60880 2.0kb upstream 2.0kb upstream 2000 false Bd2: 57926766-57928765 Brachypodium distachyon
Bradi2g60880 2.0kb downstream 2.0kb downstream 3506 true Bd2: 57928766-57932271 Brachypodium distachyon
Bradi2g60880 2.0kb downstream 2.0kb downstream 2000 false Bd2: 57930272-57932271 Brachypodium distachyon
Bradi2g60880 5.0kb upstream 5.0kb upstream 6506 true Bd2: 57923766-57930271 Brachypodium distachyon
Bradi2g60880 5.0kb upstream 5.0kb upstream 5000 false Bd2: 57923766-57928765 Brachypodium distachyon
Bradi2g60880 5.0kb downstream 5.0kb downstream 6506 true Bd2: 57928766-57935271 Brachypodium distachyon
Bradi2g60880 5.0kb downstream 5.0kb downstream 5000 false Bd2: 57930272-57935271 Brachypodium distachyon
Bradi2g60880 10.0kb upstream 10.0kb upstream 11506 true Bd2: 57918766-57930271 Brachypodium distachyon
Bradi2g60880 10.0kb upstream 10.0kb upstream 10000 false Bd2: 57918766-57928765 Brachypodium distachyon
Bradi2g60880 10.0kb downstream 10.0kb downstream 11506 true Bd2: 57928766-57940271 Brachypodium distachyon
Bradi2g60880 10.0kb downstream 10.0kb downstream 10000 false Bd2: 57930272-57940271 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121993532 5273 Angiosperm View MSA
124579353 5269 Grass View MSA
123429111 5275 Viridiplantae View MSA
121263805 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.009     Low Low
cufflinks 0.032     Low  
cufflinks 0.035     Low  
cufflinks 0.011     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.039     Low  
cufflinks 0.069     Low  
cufflinks 0.026     Low  
cufflinks 0.017     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.033     Low  
cufflinks 0.035     Low  
cufflinks 0.062        
cufflinks 0.012     Low Low
cufflinks 0.013     Low Low
cufflinks 0.023     Low  
cufflinks 0.029     Low  
cufflinks 0.034     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.044     Low  
cufflinks 0.062     Low  
cufflinks 0.033     Low  
cufflinks 0.037     Low  
cufflinks 0.112       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.016     Low Low
cufflinks 0.028     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.034     Low  

0 Strain