Gene : Bradi3g03532 B. distachyon v3.1
Defline:  (1 of 1) PTHR13009//PTHR13009:SF5 - HEAT SHOCK PROTEIN 90 HSP90 CO-CHAPERONE AHA-1 Genomic Order:  414
Name:  ? Bradi3g03532 Secondary Identifier:  ? PAC:32822034
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g03532 0.5kb upstream 0.5kb upstream 4225 true Bd3: 2324520-2328744 Brachypodium distachyon
Bradi3g03532 0.5kb upstream 0.5kb upstream 500 false Bd3: 2324520-2325019 Brachypodium distachyon
Bradi3g03532 0.5kb downstream 0.5kb downstream 4225 true Bd3: 2325020-2329244 Brachypodium distachyon
Bradi3g03532 0.5kb downstream 0.5kb downstream 500 false Bd3: 2328745-2329244 Brachypodium distachyon
Bradi3g03532 1.0kb upstream 1.0kb upstream 4725 true Bd3: 2324020-2328744 Brachypodium distachyon
Bradi3g03532 1.0kb upstream 1.0kb upstream 1000 false Bd3: 2324020-2325019 Brachypodium distachyon
Bradi3g03532 1.0kb downstream 1.0kb downstream 4725 true Bd3: 2325020-2329744 Brachypodium distachyon
Bradi3g03532 1.0kb downstream 1.0kb downstream 1000 false Bd3: 2328745-2329744 Brachypodium distachyon
Bradi3g03532 2.0kb upstream 2.0kb upstream 5725 true Bd3: 2323020-2328744 Brachypodium distachyon
Bradi3g03532 2.0kb upstream 2.0kb upstream 2000 false Bd3: 2323020-2325019 Brachypodium distachyon
Bradi3g03532 2.0kb downstream 2.0kb downstream 5725 true Bd3: 2325020-2330744 Brachypodium distachyon
Bradi3g03532 2.0kb downstream 2.0kb downstream 2000 false Bd3: 2328745-2330744 Brachypodium distachyon
Bradi3g03532 5.0kb upstream 5.0kb upstream 8725 true Bd3: 2320020-2328744 Brachypodium distachyon
Bradi3g03532 5.0kb upstream 5.0kb upstream 5000 false Bd3: 2320020-2325019 Brachypodium distachyon
Bradi3g03532 5.0kb downstream 5.0kb downstream 8725 true Bd3: 2325020-2333744 Brachypodium distachyon
Bradi3g03532 5.0kb downstream 5.0kb downstream 5000 false Bd3: 2328745-2333744 Brachypodium distachyon
Bradi3g03532 10.0kb upstream 10.0kb upstream 13725 true Bd3: 2315020-2328744 Brachypodium distachyon
Bradi3g03532 10.0kb upstream 10.0kb upstream 10000 false Bd3: 2315020-2325019 Brachypodium distachyon
Bradi3g03532 10.0kb downstream 10.0kb downstream 13725 true Bd3: 2325020-2338744 Brachypodium distachyon
Bradi3g03532 10.0kb downstream 10.0kb downstream 10000 false Bd3: 2328745-2338744 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124571777 5269 Grass View MSA
122042378 5273 Angiosperm View MSA
121347282 5274 Embryophyte View MSA
123426157 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.188        
cufflinks 5.742        
cufflinks 5.644       Low
cufflinks 9.484        
cufflinks 27.807     High High
cufflinks 6.089        
cufflinks 5.775        
cufflinks 17.622     High  
cufflinks 7.526        
cufflinks 12.339     High  
cufflinks 9.52     High  
cufflinks 17.357     High  
cufflinks 4.472       Low
cufflinks 5.608       Low
cufflinks 16.745     High  
cufflinks 5.216       Low
cufflinks 17.103     High  
cufflinks 12.063     High  
cufflinks 23.027     High High
cufflinks 32.59     High High
cufflinks 12.612     High  
cufflinks 7.261        
cufflinks 19.474     High  
cufflinks 8.213        
cufflinks 7.927        
cufflinks 8.541        
cufflinks 4.743       Low
cufflinks 8.67        
cufflinks 7.588        
cufflinks 9.441        

0 Strain