Gene : Bradi3g04430 B. distachyon v3.1
Defline:  (1 of 1) K09499 - T-complex protein 1 subunit eta (CCT7) Genomic Order:  541
Name:  ? Bradi3g04430 Secondary Identifier:  ? PAC:32817964
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g04430 0.5kb upstream 0.5kb upstream 5868 true Bd3: 3047955-3053822 Brachypodium distachyon
Bradi3g04430 0.5kb upstream 0.5kb upstream 500 false Bd3: 3047955-3048454 Brachypodium distachyon
Bradi3g04430 0.5kb downstream 0.5kb downstream 5868 true Bd3: 3048455-3054322 Brachypodium distachyon
Bradi3g04430 0.5kb downstream 0.5kb downstream 500 false Bd3: 3053823-3054322 Brachypodium distachyon
Bradi3g04430 1.0kb upstream 1.0kb upstream 6368 true Bd3: 3047455-3053822 Brachypodium distachyon
Bradi3g04430 1.0kb upstream 1.0kb upstream 1000 false Bd3: 3047455-3048454 Brachypodium distachyon
Bradi3g04430 1.0kb downstream 1.0kb downstream 6368 true Bd3: 3048455-3054822 Brachypodium distachyon
Bradi3g04430 1.0kb downstream 1.0kb downstream 1000 false Bd3: 3053823-3054822 Brachypodium distachyon
Bradi3g04430 2.0kb upstream 2.0kb upstream 7368 true Bd3: 3046455-3053822 Brachypodium distachyon
Bradi3g04430 2.0kb upstream 2.0kb upstream 2000 false Bd3: 3046455-3048454 Brachypodium distachyon
Bradi3g04430 2.0kb downstream 2.0kb downstream 7368 true Bd3: 3048455-3055822 Brachypodium distachyon
Bradi3g04430 2.0kb downstream 2.0kb downstream 2000 false Bd3: 3053823-3055822 Brachypodium distachyon
Bradi3g04430 5.0kb upstream 5.0kb upstream 10368 true Bd3: 3043455-3053822 Brachypodium distachyon
Bradi3g04430 5.0kb upstream 5.0kb upstream 5000 false Bd3: 3043455-3048454 Brachypodium distachyon
Bradi3g04430 5.0kb downstream 5.0kb downstream 10368 true Bd3: 3048455-3058822 Brachypodium distachyon
Bradi3g04430 5.0kb downstream 5.0kb downstream 5000 false Bd3: 3053823-3058822 Brachypodium distachyon
Bradi3g04430 10.0kb upstream 10.0kb upstream 15368 true Bd3: 3038455-3053822 Brachypodium distachyon
Bradi3g04430 10.0kb upstream 10.0kb upstream 10000 false Bd3: 3038455-3048454 Brachypodium distachyon
Bradi3g04430 10.0kb downstream 10.0kb downstream 15368 true Bd3: 3048455-3063822 Brachypodium distachyon
Bradi3g04430 10.0kb downstream 10.0kb downstream 10000 false Bd3: 3053823-3063822 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124569408 5269 Grass View MSA
122049781 5273 Angiosperm View MSA
121344001 5274 Embryophyte View MSA
123424590 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.527     High  
cufflinks 26.862     High  
cufflinks 23.868     High  
cufflinks 24.471     High  
cufflinks 12.572     High  
cufflinks 24.048     High  
cufflinks 23.443     High  
cufflinks 17.457     High  
cufflinks 21.663     High  
cufflinks 12.756     High  
cufflinks 7.826       Low
cufflinks 19.318     High  
cufflinks 4.999       Low
cufflinks 6.011       Low
cufflinks 10.867     High  
cufflinks 24.752     High  
cufflinks 19.793     High  
cufflinks 47.972     High High
cufflinks 16.62     High  
cufflinks 3.607       Low
cufflinks 21.009     High  
cufflinks 18.856     High  
cufflinks 17.256     High  
cufflinks 19.247     High  
cufflinks 22.47     High  
cufflinks 18.478     High  
cufflinks 7.28       Low
cufflinks 14.941     High  
cufflinks 16.564     High  
cufflinks 29.732     High High

0 Strain