Gene : Bradi3g04550 B. distachyon v3.1
Defline:  (1 of 1) K12599 - antiviral helicase SKI2 (SKI2, SKIV2L) Genomic Order:  555
Name:  ? Bradi3g04550 Secondary Identifier:  ? PAC:32815990
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g04550 0.5kb upstream 0.5kb upstream 17036 true Bd3: 3104262-3121297 Brachypodium distachyon
Bradi3g04550 0.5kb upstream 0.5kb upstream 500 false Bd3: 3120798-3121297 Brachypodium distachyon
Bradi3g04550 0.5kb downstream 0.5kb downstream 17036 true Bd3: 3103762-3120797 Brachypodium distachyon
Bradi3g04550 0.5kb downstream 0.5kb downstream 500 false Bd3: 3103762-3104261 Brachypodium distachyon
Bradi3g04550 1.0kb upstream 1.0kb upstream 17536 true Bd3: 3104262-3121797 Brachypodium distachyon
Bradi3g04550 1.0kb upstream 1.0kb upstream 1000 false Bd3: 3120798-3121797 Brachypodium distachyon
Bradi3g04550 1.0kb downstream 1.0kb downstream 17536 true Bd3: 3103262-3120797 Brachypodium distachyon
Bradi3g04550 1.0kb downstream 1.0kb downstream 1000 false Bd3: 3103262-3104261 Brachypodium distachyon
Bradi3g04550 2.0kb upstream 2.0kb upstream 18536 true Bd3: 3104262-3122797 Brachypodium distachyon
Bradi3g04550 2.0kb upstream 2.0kb upstream 2000 false Bd3: 3120798-3122797 Brachypodium distachyon
Bradi3g04550 2.0kb downstream 2.0kb downstream 18536 true Bd3: 3102262-3120797 Brachypodium distachyon
Bradi3g04550 2.0kb downstream 2.0kb downstream 2000 false Bd3: 3102262-3104261 Brachypodium distachyon
Bradi3g04550 5.0kb upstream 5.0kb upstream 21536 true Bd3: 3104262-3125797 Brachypodium distachyon
Bradi3g04550 5.0kb upstream 5.0kb upstream 5000 false Bd3: 3120798-3125797 Brachypodium distachyon
Bradi3g04550 5.0kb downstream 5.0kb downstream 21536 true Bd3: 3099262-3120797 Brachypodium distachyon
Bradi3g04550 5.0kb downstream 5.0kb downstream 5000 false Bd3: 3099262-3104261 Brachypodium distachyon
Bradi3g04550 10.0kb upstream 10.0kb upstream 26536 true Bd3: 3104262-3130797 Brachypodium distachyon
Bradi3g04550 10.0kb upstream 10.0kb upstream 10000 false Bd3: 3120798-3130797 Brachypodium distachyon
Bradi3g04550 10.0kb downstream 10.0kb downstream 26536 true Bd3: 3094262-3120797 Brachypodium distachyon
Bradi3g04550 10.0kb downstream 10.0kb downstream 10000 false Bd3: 3094262-3104261 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124581185 5269 Grass View MSA
122042140 5273 Angiosperm View MSA
121344115 5274 Embryophyte View MSA
123424218 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.481        
cufflinks 0.92        
cufflinks 1.082       High
cufflinks 0.696        
cufflinks 0.274       Low
cufflinks 0.77        
cufflinks 0.75        
cufflinks 0.602        
cufflinks 0.77        
cufflinks 0.662        
cufflinks 0.909        
cufflinks 0.755        
cufflinks 0.578        
cufflinks 0.588        
cufflinks 0.323       Low
cufflinks 0.775        
cufflinks 0.356       Low
cufflinks 1.102       High
cufflinks 0.703        
cufflinks 0.388       Low
cufflinks 0.519        
cufflinks 1.143       High
cufflinks 0.612        
cufflinks 0.605        
cufflinks 0.713        
cufflinks 0.937        
cufflinks 0.74        
cufflinks 0.965        
cufflinks 0.964        
cufflinks 0.845        

0 Strain