Gene : Bradi3g01377 B. distachyon v3.1
Defline:  (1 of 1) PTHR10641//PTHR10641:SF590 - MYB-LIKE DNA-BINDING PROTEIN MYB Genomic Order:  144
Name:  ? Bradi3g01377 Secondary Identifier:  ? PAC:32815741
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g01377 0.5kb upstream 0.5kb upstream 2825 true Bd3: 888056-890880 Brachypodium distachyon
Bradi3g01377 0.5kb upstream 0.5kb upstream 500 false Bd3: 890381-890880 Brachypodium distachyon
Bradi3g01377 0.5kb downstream 0.5kb downstream 2825 true Bd3: 887556-890380 Brachypodium distachyon
Bradi3g01377 0.5kb downstream 0.5kb downstream 500 false Bd3: 887556-888055 Brachypodium distachyon
Bradi3g01377 1.0kb upstream 1.0kb upstream 3325 true Bd3: 888056-891380 Brachypodium distachyon
Bradi3g01377 1.0kb upstream 1.0kb upstream 1000 false Bd3: 890381-891380 Brachypodium distachyon
Bradi3g01377 1.0kb downstream 1.0kb downstream 3325 true Bd3: 887056-890380 Brachypodium distachyon
Bradi3g01377 1.0kb downstream 1.0kb downstream 1000 false Bd3: 887056-888055 Brachypodium distachyon
Bradi3g01377 2.0kb upstream 2.0kb upstream 4325 true Bd3: 888056-892380 Brachypodium distachyon
Bradi3g01377 2.0kb upstream 2.0kb upstream 2000 false Bd3: 890381-892380 Brachypodium distachyon
Bradi3g01377 2.0kb downstream 2.0kb downstream 4325 true Bd3: 886056-890380 Brachypodium distachyon
Bradi3g01377 2.0kb downstream 2.0kb downstream 2000 false Bd3: 886056-888055 Brachypodium distachyon
Bradi3g01377 5.0kb upstream 5.0kb upstream 7325 true Bd3: 888056-895380 Brachypodium distachyon
Bradi3g01377 5.0kb upstream 5.0kb upstream 5000 false Bd3: 890381-895380 Brachypodium distachyon
Bradi3g01377 5.0kb downstream 5.0kb downstream 7325 true Bd3: 883056-890380 Brachypodium distachyon
Bradi3g01377 5.0kb downstream 5.0kb downstream 5000 false Bd3: 883056-888055 Brachypodium distachyon
Bradi3g01377 10.0kb upstream 10.0kb upstream 12325 true Bd3: 888056-900380 Brachypodium distachyon
Bradi3g01377 10.0kb upstream 10.0kb upstream 10000 false Bd3: 890381-900380 Brachypodium distachyon
Bradi3g01377 10.0kb downstream 10.0kb downstream 12325 true Bd3: 878056-890380 Brachypodium distachyon
Bradi3g01377 10.0kb downstream 10.0kb downstream 10000 false Bd3: 878056-888055 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124579340 5269 Grass View MSA
122049039 5273 Angiosperm View MSA
121311219 5274 Embryophyte View MSA
123348543 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.029     Low  
cufflinks 0.013     Low Low
cufflinks 0.031     Low  
cufflinks 0.079     Low  
cufflinks 0.033     Low  
cufflinks 0.035     Low  
cufflinks 0.044     Low  
cufflinks 0.011     Low Low
cufflinks 0.044     Low  
cufflinks 0.063     Low  
cufflinks 0.014     Low  
cufflinks 0.02     Low  
cufflinks 0.028     Low  
cufflinks 0.037     Low  
cufflinks 0.022     Low  
cufflinks 0.039     Low  
cufflinks 0.065     Low  
cufflinks 5.595       High
cufflinks 0.115     Low  
cufflinks 0.044     Low  
cufflinks 0.106        
cufflinks 0.08     Low  
cufflinks 0.007     Low Low
cufflinks 0.039     Low  
cufflinks 0.048     Low  
cufflinks 0.072     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.092     Low  
cufflinks 0.039     Low  
cufflinks 0.022     Low  

0 Strain