Gene : Bradi3g02630 B. distachyon v3.1
Defline:  (1 of 2) PTHR21094 - GOS-28 SNARE- RELATED Genomic Order:  295
Name:  ? Bradi3g02630 Secondary Identifier:  ? PAC:32820519
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g02630 0.5kb upstream 0.5kb upstream 2583 true Bd3: 1596169-1598751 Brachypodium distachyon
Bradi3g02630 0.5kb upstream 0.5kb upstream 500 false Bd3: 1596169-1596668 Brachypodium distachyon
Bradi3g02630 0.5kb downstream 0.5kb downstream 2583 true Bd3: 1596669-1599251 Brachypodium distachyon
Bradi3g02630 0.5kb downstream 0.5kb downstream 500 false Bd3: 1598752-1599251 Brachypodium distachyon
Bradi3g02630 1.0kb upstream 1.0kb upstream 3083 true Bd3: 1595669-1598751 Brachypodium distachyon
Bradi3g02630 1.0kb upstream 1.0kb upstream 1000 false Bd3: 1595669-1596668 Brachypodium distachyon
Bradi3g02630 1.0kb downstream 1.0kb downstream 3083 true Bd3: 1596669-1599751 Brachypodium distachyon
Bradi3g02630 1.0kb downstream 1.0kb downstream 1000 false Bd3: 1598752-1599751 Brachypodium distachyon
Bradi3g02630 2.0kb upstream 2.0kb upstream 4083 true Bd3: 1594669-1598751 Brachypodium distachyon
Bradi3g02630 2.0kb upstream 2.0kb upstream 2000 false Bd3: 1594669-1596668 Brachypodium distachyon
Bradi3g02630 2.0kb downstream 2.0kb downstream 4083 true Bd3: 1596669-1600751 Brachypodium distachyon
Bradi3g02630 2.0kb downstream 2.0kb downstream 2000 false Bd3: 1598752-1600751 Brachypodium distachyon
Bradi3g02630 5.0kb upstream 5.0kb upstream 7083 true Bd3: 1591669-1598751 Brachypodium distachyon
Bradi3g02630 5.0kb upstream 5.0kb upstream 5000 false Bd3: 1591669-1596668 Brachypodium distachyon
Bradi3g02630 5.0kb downstream 5.0kb downstream 7083 true Bd3: 1596669-1603751 Brachypodium distachyon
Bradi3g02630 5.0kb downstream 5.0kb downstream 5000 false Bd3: 1598752-1603751 Brachypodium distachyon
Bradi3g02630 10.0kb upstream 10.0kb upstream 12083 true Bd3: 1586669-1598751 Brachypodium distachyon
Bradi3g02630 10.0kb upstream 10.0kb upstream 10000 false Bd3: 1586669-1596668 Brachypodium distachyon
Bradi3g02630 10.0kb downstream 10.0kb downstream 12083 true Bd3: 1596669-1608751 Brachypodium distachyon
Bradi3g02630 10.0kb downstream 10.0kb downstream 10000 false Bd3: 1598752-1608751 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124571575 5269 Grass View MSA
122046989 5273 Angiosperm View MSA
121345350 5274 Embryophyte View MSA
123427960 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.703        
cufflinks 4.761        
cufflinks 4.388        
cufflinks 4.767        
cufflinks 7.855       High
cufflinks 4.595        
cufflinks 4.944        
cufflinks 4.955        
cufflinks 4.513        
cufflinks 5.929        
cufflinks 5.072        
cufflinks 3.482       Low
cufflinks 3.722       Low
cufflinks 3.99       Low
cufflinks 4.508        
cufflinks 4.623        
cufflinks 5.231        
cufflinks 6.721        
cufflinks 10.397       High
cufflinks 11.574     High High
cufflinks 8.182       High
cufflinks 3.944       Low
cufflinks 4.768        
cufflinks 5.249        
cufflinks 5.505        
cufflinks 4.567        
cufflinks 5.488        
cufflinks 5.447        
cufflinks 4.219        
cufflinks 5.302        

0 Strain