Gene : Bradi3g07980 B. distachyon v3.1
Genomic Order:  1016 Name:  ? Bradi3g07980
Secondary Identifier:  ? PAC:32812693
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g07980 0.5kb upstream 0.5kb upstream 2758 true Bd3: 6206959-6209716 Brachypodium distachyon
Bradi3g07980 0.5kb upstream 0.5kb upstream 500 false Bd3: 6206959-6207458 Brachypodium distachyon
Bradi3g07980 0.5kb downstream 0.5kb downstream 2758 true Bd3: 6207459-6210216 Brachypodium distachyon
Bradi3g07980 0.5kb downstream 0.5kb downstream 500 false Bd3: 6209717-6210216 Brachypodium distachyon
Bradi3g07980 1.0kb upstream 1.0kb upstream 3258 true Bd3: 6206459-6209716 Brachypodium distachyon
Bradi3g07980 1.0kb upstream 1.0kb upstream 1000 false Bd3: 6206459-6207458 Brachypodium distachyon
Bradi3g07980 1.0kb downstream 1.0kb downstream 3258 true Bd3: 6207459-6210716 Brachypodium distachyon
Bradi3g07980 1.0kb downstream 1.0kb downstream 1000 false Bd3: 6209717-6210716 Brachypodium distachyon
Bradi3g07980 2.0kb upstream 2.0kb upstream 4258 true Bd3: 6205459-6209716 Brachypodium distachyon
Bradi3g07980 2.0kb upstream 2.0kb upstream 2000 false Bd3: 6205459-6207458 Brachypodium distachyon
Bradi3g07980 2.0kb downstream 2.0kb downstream 4258 true Bd3: 6207459-6211716 Brachypodium distachyon
Bradi3g07980 2.0kb downstream 2.0kb downstream 2000 false Bd3: 6209717-6211716 Brachypodium distachyon
Bradi3g07980 5.0kb upstream 5.0kb upstream 7258 true Bd3: 6202459-6209716 Brachypodium distachyon
Bradi3g07980 5.0kb upstream 5.0kb upstream 5000 false Bd3: 6202459-6207458 Brachypodium distachyon
Bradi3g07980 5.0kb downstream 5.0kb downstream 7258 true Bd3: 6207459-6214716 Brachypodium distachyon
Bradi3g07980 5.0kb downstream 5.0kb downstream 5000 false Bd3: 6209717-6214716 Brachypodium distachyon
Bradi3g07980 10.0kb upstream 10.0kb upstream 12258 true Bd3: 6197459-6209716 Brachypodium distachyon
Bradi3g07980 10.0kb upstream 10.0kb upstream 10000 false Bd3: 6197459-6207458 Brachypodium distachyon
Bradi3g07980 10.0kb downstream 10.0kb downstream 12258 true Bd3: 6207459-6219716 Brachypodium distachyon
Bradi3g07980 10.0kb downstream 10.0kb downstream 10000 false Bd3: 6209717-6219716 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124587108 5269 Grass View MSA
122047280 5273 Angiosperm View MSA
121349070 5274 Embryophyte View MSA
123381150 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.007     Low Low
cufflinks 0.003     Low Low
cufflinks 0.107        
cufflinks 0.006     Low Low
cufflinks 0.642        
cufflinks 0.008     Low Low
cufflinks 0.02     Low  
cufflinks 0.012     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.489        
cufflinks 0.016     Low  
cufflinks 0.002     Low Low
cufflinks 0.028     Low  
cufflinks 0.013     Low  
cufflinks 0.014     Low  
cufflinks 0.194        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 3.786       High
cufflinks 0.316        
cufflinks 7.915       High
cufflinks 2.873       High
cufflinks 0.115     Low  
cufflinks 0.006     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low Low
cufflinks 0.29        
cufflinks 0.323        
cufflinks 0.605        
cufflinks 0.103     Low  
cufflinks 0.477        

0 Strain