Gene : Bradi3g07926 B. distachyon v3.1
Defline:  (1 of 3) PTHR19876:SF6 - COATOMER SUBUNIT BETA'-1 Genomic Order:  1003
Name:  ? Bradi3g07926 Secondary Identifier:  ? PAC:32818138
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g07926 0.5kb upstream 0.5kb upstream 12368 true Bd3: 6103823-6116190 Brachypodium distachyon
Bradi3g07926 0.5kb upstream 0.5kb upstream 500 false Bd3: 6115691-6116190 Brachypodium distachyon
Bradi3g07926 0.5kb downstream 0.5kb downstream 12368 true Bd3: 6103323-6115690 Brachypodium distachyon
Bradi3g07926 0.5kb downstream 0.5kb downstream 500 false Bd3: 6103323-6103822 Brachypodium distachyon
Bradi3g07926 1.0kb upstream 1.0kb upstream 12868 true Bd3: 6103823-6116690 Brachypodium distachyon
Bradi3g07926 1.0kb upstream 1.0kb upstream 1000 false Bd3: 6115691-6116690 Brachypodium distachyon
Bradi3g07926 1.0kb downstream 1.0kb downstream 12868 true Bd3: 6102823-6115690 Brachypodium distachyon
Bradi3g07926 1.0kb downstream 1.0kb downstream 1000 false Bd3: 6102823-6103822 Brachypodium distachyon
Bradi3g07926 2.0kb upstream 2.0kb upstream 13868 true Bd3: 6103823-6117690 Brachypodium distachyon
Bradi3g07926 2.0kb upstream 2.0kb upstream 2000 false Bd3: 6115691-6117690 Brachypodium distachyon
Bradi3g07926 2.0kb downstream 2.0kb downstream 13868 true Bd3: 6101823-6115690 Brachypodium distachyon
Bradi3g07926 2.0kb downstream 2.0kb downstream 2000 false Bd3: 6101823-6103822 Brachypodium distachyon
Bradi3g07926 5.0kb upstream 5.0kb upstream 16868 true Bd3: 6103823-6120690 Brachypodium distachyon
Bradi3g07926 5.0kb upstream 5.0kb upstream 5000 false Bd3: 6115691-6120690 Brachypodium distachyon
Bradi3g07926 5.0kb downstream 5.0kb downstream 16868 true Bd3: 6098823-6115690 Brachypodium distachyon
Bradi3g07926 5.0kb downstream 5.0kb downstream 5000 false Bd3: 6098823-6103822 Brachypodium distachyon
Bradi3g07926 10.0kb upstream 10.0kb upstream 21868 true Bd3: 6103823-6125690 Brachypodium distachyon
Bradi3g07926 10.0kb upstream 10.0kb upstream 10000 false Bd3: 6115691-6125690 Brachypodium distachyon
Bradi3g07926 10.0kb downstream 10.0kb downstream 21868 true Bd3: 6093823-6115690 Brachypodium distachyon
Bradi3g07926 10.0kb downstream 10.0kb downstream 10000 false Bd3: 6093823-6103822 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124569399 5269 Grass View MSA
122046089 5273 Angiosperm View MSA
121350905 5274 Embryophyte View MSA
123424044 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.278     High  
cufflinks 11.022     High  
cufflinks 10.995     High  
cufflinks 9.522        
cufflinks 4.991        
cufflinks 10.662     High  
cufflinks 8.793        
cufflinks 8.499        
cufflinks 10.503     High  
cufflinks 5.875        
cufflinks 6.036        
cufflinks 11.421     High  
cufflinks 5.163        
cufflinks 4.405       Low
cufflinks 6.803        
cufflinks 11.643     High  
cufflinks 9.262        
cufflinks 24.611     High High
cufflinks 11.155        
cufflinks 2.998       Low
cufflinks 12.626     High  
cufflinks 11.342     High  
cufflinks 8.983        
cufflinks 10.787     High  
cufflinks 9.086        
cufflinks 9.458        
cufflinks 5.681        
cufflinks 8.178        
cufflinks 8.718        
cufflinks 15.679     High High

0 Strain