Gene : Bradi3g08100 B. distachyon v3.1
Defline:  (1 of 1) K15264 - putative methyltransferase [EC:2.1.1.-] (NSUN5, WBSCR20) Genomic Order:  1030
Name:  ? Bradi3g08100 Secondary Identifier:  ? PAC:32818622
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g08100 0.5kb upstream 0.5kb upstream 6410 true Bd3: 6306405-6312814 Brachypodium distachyon
Bradi3g08100 0.5kb upstream 0.5kb upstream 500 false Bd3: 6306405-6306904 Brachypodium distachyon
Bradi3g08100 0.5kb downstream 0.5kb downstream 6410 true Bd3: 6306905-6313314 Brachypodium distachyon
Bradi3g08100 0.5kb downstream 0.5kb downstream 500 false Bd3: 6312815-6313314 Brachypodium distachyon
Bradi3g08100 1.0kb upstream 1.0kb upstream 6910 true Bd3: 6305905-6312814 Brachypodium distachyon
Bradi3g08100 1.0kb upstream 1.0kb upstream 1000 false Bd3: 6305905-6306904 Brachypodium distachyon
Bradi3g08100 1.0kb downstream 1.0kb downstream 6910 true Bd3: 6306905-6313814 Brachypodium distachyon
Bradi3g08100 1.0kb downstream 1.0kb downstream 1000 false Bd3: 6312815-6313814 Brachypodium distachyon
Bradi3g08100 2.0kb upstream 2.0kb upstream 7910 true Bd3: 6304905-6312814 Brachypodium distachyon
Bradi3g08100 2.0kb upstream 2.0kb upstream 2000 false Bd3: 6304905-6306904 Brachypodium distachyon
Bradi3g08100 2.0kb downstream 2.0kb downstream 7910 true Bd3: 6306905-6314814 Brachypodium distachyon
Bradi3g08100 2.0kb downstream 2.0kb downstream 2000 false Bd3: 6312815-6314814 Brachypodium distachyon
Bradi3g08100 5.0kb upstream 5.0kb upstream 10910 true Bd3: 6301905-6312814 Brachypodium distachyon
Bradi3g08100 5.0kb upstream 5.0kb upstream 5000 false Bd3: 6301905-6306904 Brachypodium distachyon
Bradi3g08100 5.0kb downstream 5.0kb downstream 10910 true Bd3: 6306905-6317814 Brachypodium distachyon
Bradi3g08100 5.0kb downstream 5.0kb downstream 5000 false Bd3: 6312815-6317814 Brachypodium distachyon
Bradi3g08100 10.0kb upstream 10.0kb upstream 15910 true Bd3: 6296905-6312814 Brachypodium distachyon
Bradi3g08100 10.0kb upstream 10.0kb upstream 10000 false Bd3: 6296905-6306904 Brachypodium distachyon
Bradi3g08100 10.0kb downstream 10.0kb downstream 15910 true Bd3: 6306905-6322814 Brachypodium distachyon
Bradi3g08100 10.0kb downstream 10.0kb downstream 10000 false Bd3: 6312815-6322814 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124588079 5269 Grass View MSA
122043756 5273 Angiosperm View MSA
121346877 5274 Embryophyte View MSA
123427921 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.636        
cufflinks 0.849       High
cufflinks 0.578        
cufflinks 0.772        
cufflinks 0.355        
cufflinks 0.581        
cufflinks 0.782        
cufflinks 0.347        
cufflinks 0.489        
cufflinks 0.487        
cufflinks 0.5        
cufflinks 0.408        
cufflinks 0.238       Low
cufflinks 0.298       Low
cufflinks 0.239       Low
cufflinks 0.612        
cufflinks 0.604        
cufflinks 1.004       High
cufflinks 1.035       High
cufflinks 0.194       Low
cufflinks 0.459        
cufflinks 0.475        
cufflinks 0.303       Low
cufflinks 0.43        
cufflinks 0.668        
cufflinks 0.619        
cufflinks 0.43        
cufflinks 0.598        
cufflinks 0.49        
cufflinks 0.521        

0 Strain