Gene : Bradi3g09550 B. distachyon v3.1
Defline:  (1 of 1) PTHR10217//PTHR10217:SF465 - VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL // CYCLIC NUCLEOTIDE-GATED ION CHANNEL 11-RELATED Genomic Order:  1225
Name:  ? Bradi3g09550 Secondary Identifier:  ? PAC:32812988
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g09550 0.5kb upstream 0.5kb upstream 11226 true Bd3: 7689107-7700332 Brachypodium distachyon
Bradi3g09550 0.5kb upstream 0.5kb upstream 500 false Bd3: 7699833-7700332 Brachypodium distachyon
Bradi3g09550 0.5kb downstream 0.5kb downstream 11226 true Bd3: 7688607-7699832 Brachypodium distachyon
Bradi3g09550 0.5kb downstream 0.5kb downstream 500 false Bd3: 7688607-7689106 Brachypodium distachyon
Bradi3g09550 1.0kb upstream 1.0kb upstream 11726 true Bd3: 7689107-7700832 Brachypodium distachyon
Bradi3g09550 1.0kb upstream 1.0kb upstream 1000 false Bd3: 7699833-7700832 Brachypodium distachyon
Bradi3g09550 1.0kb downstream 1.0kb downstream 11726 true Bd3: 7688107-7699832 Brachypodium distachyon
Bradi3g09550 1.0kb downstream 1.0kb downstream 1000 false Bd3: 7688107-7689106 Brachypodium distachyon
Bradi3g09550 2.0kb upstream 2.0kb upstream 12726 true Bd3: 7689107-7701832 Brachypodium distachyon
Bradi3g09550 2.0kb upstream 2.0kb upstream 2000 false Bd3: 7699833-7701832 Brachypodium distachyon
Bradi3g09550 2.0kb downstream 2.0kb downstream 12726 true Bd3: 7687107-7699832 Brachypodium distachyon
Bradi3g09550 2.0kb downstream 2.0kb downstream 2000 false Bd3: 7687107-7689106 Brachypodium distachyon
Bradi3g09550 5.0kb upstream 5.0kb upstream 15726 true Bd3: 7689107-7704832 Brachypodium distachyon
Bradi3g09550 5.0kb upstream 5.0kb upstream 5000 false Bd3: 7699833-7704832 Brachypodium distachyon
Bradi3g09550 5.0kb downstream 5.0kb downstream 15726 true Bd3: 7684107-7699832 Brachypodium distachyon
Bradi3g09550 5.0kb downstream 5.0kb downstream 5000 false Bd3: 7684107-7689106 Brachypodium distachyon
Bradi3g09550 10.0kb upstream 10.0kb upstream 20726 true Bd3: 7689107-7709832 Brachypodium distachyon
Bradi3g09550 10.0kb upstream 10.0kb upstream 10000 false Bd3: 7699833-7709832 Brachypodium distachyon
Bradi3g09550 10.0kb downstream 10.0kb downstream 20726 true Bd3: 7679107-7699832 Brachypodium distachyon
Bradi3g09550 10.0kb downstream 10.0kb downstream 10000 false Bd3: 7679107-7689106 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124585108 5269 Grass View MSA
122044448 5273 Angiosperm View MSA
121351754 5274 Embryophyte View MSA
123428762 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.712        
cufflinks 1.104        
cufflinks 1.275        
cufflinks 0.962        
cufflinks 0.518       Low
cufflinks 1.023        
cufflinks 0.954        
cufflinks 0.74        
cufflinks 0.836        
cufflinks 0.739        
cufflinks 1.287        
cufflinks 1.175        
cufflinks 1.29        
cufflinks 1.038        
cufflinks 1.116        
cufflinks 1.065        
cufflinks 0.776        
cufflinks 1.595       High
cufflinks 0.908        
cufflinks 0.362       Low
cufflinks 1.106        
cufflinks 1.059        
cufflinks 0.735        
cufflinks 0.913        
cufflinks 0.823        
cufflinks 1.176        
cufflinks 1.621       High
cufflinks 1.057        
cufflinks 0.982        
cufflinks 1.261        

0 Strain