Gene : Bradi4g44130 B. distachyon v3.1
Defline:  (1 of 4) K00967 - ethanolamine-phosphate cytidylyltransferase (PCYT2) Genomic Order:  5685
Name:  ? Bradi4g44130 Secondary Identifier:  ? PAC:32790045
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY4FS-6 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g44130 0.5kb upstream 0.5kb upstream 5964 true Bd4: 47586161-47592124 Brachypodium distachyon
Bradi4g44130 0.5kb upstream 0.5kb upstream 500 false Bd4: 47586161-47586660 Brachypodium distachyon
Bradi4g44130 0.5kb downstream 0.5kb downstream 5964 true Bd4: 47586661-47592624 Brachypodium distachyon
Bradi4g44130 0.5kb downstream 0.5kb downstream 500 false Bd4: 47592125-47592624 Brachypodium distachyon
Bradi4g44130 1.0kb upstream 1.0kb upstream 6464 true Bd4: 47585661-47592124 Brachypodium distachyon
Bradi4g44130 1.0kb upstream 1.0kb upstream 1000 false Bd4: 47585661-47586660 Brachypodium distachyon
Bradi4g44130 1.0kb downstream 1.0kb downstream 6464 true Bd4: 47586661-47593124 Brachypodium distachyon
Bradi4g44130 1.0kb downstream 1.0kb downstream 1000 false Bd4: 47592125-47593124 Brachypodium distachyon
Bradi4g44130 2.0kb upstream 2.0kb upstream 7464 true Bd4: 47584661-47592124 Brachypodium distachyon
Bradi4g44130 2.0kb upstream 2.0kb upstream 2000 false Bd4: 47584661-47586660 Brachypodium distachyon
Bradi4g44130 2.0kb downstream 2.0kb downstream 7464 true Bd4: 47586661-47594124 Brachypodium distachyon
Bradi4g44130 2.0kb downstream 2.0kb downstream 2000 false Bd4: 47592125-47594124 Brachypodium distachyon
Bradi4g44130 5.0kb upstream 5.0kb upstream 10464 true Bd4: 47581661-47592124 Brachypodium distachyon
Bradi4g44130 5.0kb upstream 5.0kb upstream 5000 false Bd4: 47581661-47586660 Brachypodium distachyon
Bradi4g44130 5.0kb downstream 5.0kb downstream 10464 true Bd4: 47586661-47597124 Brachypodium distachyon
Bradi4g44130 5.0kb downstream 5.0kb downstream 5000 false Bd4: 47592125-47597124 Brachypodium distachyon
Bradi4g44130 10.0kb upstream 10.0kb upstream 15464 true Bd4: 47576661-47592124 Brachypodium distachyon
Bradi4g44130 10.0kb upstream 10.0kb upstream 10000 false Bd4: 47576661-47586660 Brachypodium distachyon
Bradi4g44130 10.0kb downstream 10.0kb downstream 15464 true Bd4: 47586661-47602124 Brachypodium distachyon
Bradi4g44130 10.0kb downstream 10.0kb downstream 10000 false Bd4: 47592125-47602124 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124545393 5269 Grass View MSA
122041937 5273 Angiosperm View MSA
121349404 5274 Embryophyte View MSA
123426391 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.457        
cufflinks 2.67        
cufflinks 1.853        
cufflinks 2.843        
cufflinks 20.778     High High
cufflinks 2.004        
cufflinks 2.816        
cufflinks 2.036        
cufflinks 2.158        
cufflinks 2.06        
cufflinks 2.827        
cufflinks 1.979        
cufflinks 1.295       Low
cufflinks 1.481        
cufflinks 2.452        
cufflinks 1.464        
cufflinks 2.679        
cufflinks 2.158        
cufflinks 21.382     High High
cufflinks 39.325     High High
cufflinks 2.066        
cufflinks 2.054        
cufflinks 3.856        
cufflinks 2.504        
cufflinks 2.546        
cufflinks 2.473        
cufflinks 1.526        
cufflinks 2.255        
cufflinks 2.095        
cufflinks 3.014        

0 Strain