Gene : Bradi3g05780 B. distachyon v3.1
Defline:  (1 of 2) 2.7.1.16 - Ribulokinase / L-ribulokinase Genomic Order:  710
Name:  ? Bradi3g05780 Secondary Identifier:  ? PAC:32821430
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g05780 0.5kb upstream 0.5kb upstream 6875 true Bd3: 4121073-4127947 Brachypodium distachyon
Bradi3g05780 0.5kb upstream 0.5kb upstream 500 false Bd3: 4121073-4121572 Brachypodium distachyon
Bradi3g05780 0.5kb downstream 0.5kb downstream 6875 true Bd3: 4121573-4128447 Brachypodium distachyon
Bradi3g05780 0.5kb downstream 0.5kb downstream 500 false Bd3: 4127948-4128447 Brachypodium distachyon
Bradi3g05780 1.0kb upstream 1.0kb upstream 7375 true Bd3: 4120573-4127947 Brachypodium distachyon
Bradi3g05780 1.0kb upstream 1.0kb upstream 1000 false Bd3: 4120573-4121572 Brachypodium distachyon
Bradi3g05780 1.0kb downstream 1.0kb downstream 7375 true Bd3: 4121573-4128947 Brachypodium distachyon
Bradi3g05780 1.0kb downstream 1.0kb downstream 1000 false Bd3: 4127948-4128947 Brachypodium distachyon
Bradi3g05780 2.0kb upstream 2.0kb upstream 8375 true Bd3: 4119573-4127947 Brachypodium distachyon
Bradi3g05780 2.0kb upstream 2.0kb upstream 2000 false Bd3: 4119573-4121572 Brachypodium distachyon
Bradi3g05780 2.0kb downstream 2.0kb downstream 8375 true Bd3: 4121573-4129947 Brachypodium distachyon
Bradi3g05780 2.0kb downstream 2.0kb downstream 2000 false Bd3: 4127948-4129947 Brachypodium distachyon
Bradi3g05780 5.0kb upstream 5.0kb upstream 11375 true Bd3: 4116573-4127947 Brachypodium distachyon
Bradi3g05780 5.0kb upstream 5.0kb upstream 5000 false Bd3: 4116573-4121572 Brachypodium distachyon
Bradi3g05780 5.0kb downstream 5.0kb downstream 11375 true Bd3: 4121573-4132947 Brachypodium distachyon
Bradi3g05780 5.0kb downstream 5.0kb downstream 5000 false Bd3: 4127948-4132947 Brachypodium distachyon
Bradi3g05780 10.0kb upstream 10.0kb upstream 16375 true Bd3: 4111573-4127947 Brachypodium distachyon
Bradi3g05780 10.0kb upstream 10.0kb upstream 10000 false Bd3: 4111573-4121572 Brachypodium distachyon
Bradi3g05780 10.0kb downstream 10.0kb downstream 16375 true Bd3: 4121573-4137947 Brachypodium distachyon
Bradi3g05780 10.0kb downstream 10.0kb downstream 10000 false Bd3: 4127948-4137947 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124587126 5269 Grass View MSA
122044620 5273 Angiosperm View MSA
121349979 5274 Embryophyte View MSA
123427238 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.558     High  
cufflinks 24.386     High  
cufflinks 36.15     High High
cufflinks 21.202     High  
cufflinks 14.312     High Low
cufflinks 25.984     High  
cufflinks 24.285     High  
cufflinks 27.432     High  
cufflinks 24.714     High  
cufflinks 42.958     High High
cufflinks 43.675     High High
cufflinks 27.146     High  
cufflinks 30.961     High  
cufflinks 35.4     High High
cufflinks 21.985     High  
cufflinks 27.556     High  
cufflinks 19.869     High  
cufflinks 14.767     High Low
cufflinks 22.206     High  
cufflinks 9.75       Low
cufflinks 12.593     High Low
cufflinks 48.722     High High
cufflinks 23.837     High  
cufflinks 21.72     High  
cufflinks 20.491     High  
cufflinks 41.202     High High
cufflinks 40.938     High High
cufflinks 45.541     High High
cufflinks 46.61     High High
cufflinks 12.794     High Low

0 Strain